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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data pareg
###
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* checking for file ‘pareg/DESCRIPTION’ ... OK
* preparing ‘pareg’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘pareg.Rmd’ using rmarkdown
2024-11-08 18:30:59.125 R[45310:2650748] XType: Using static font registry.
Channels:
 - anaconda
Platform: osx-arm64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /Users/biocbuild/Library/Caches/org.R-project.R/R/basilisk/1.18.0/pareg/1.10.0/pareg

  added / updated specs:
    - python=3.10.14


The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    bzip2-1.0.8                |       h80987f9_6         155 KB  anaconda
    ca-certificates-2024.9.24  |       hca03da5_0         138 KB  anaconda
    libffi-3.4.4               |       hca03da5_1         118 KB  anaconda
    ncurses-6.4                |       h313beb8_0         1.0 MB  anaconda
    openssl-3.0.15             |       h80987f9_0         4.5 MB  anaconda
    pip-24.2                   |  py310hca03da5_0         2.2 MB  anaconda
    python-3.10.14             |       hb885b13_1        13.2 MB  anaconda
    readline-8.2               |       h1a28f6b_0         453 KB  anaconda
    setuptools-75.1.0          |  py310hca03da5_0         1.7 MB  anaconda
    sqlite-3.45.3              |       h80987f9_0         1.7 MB  anaconda
    tk-8.6.14                  |       h6ba3021_0         3.3 MB  anaconda
    tzdata-2024b               |       h04d1e81_0         121 KB  anaconda
    wheel-0.44.0               |  py310hca03da5_0         104 KB  anaconda
    xz-5.4.6                   |       h80987f9_1         448 KB  anaconda
    zlib-1.2.13                |       h18a0788_1         102 KB  anaconda
    ------------------------------------------------------------
                                           Total:        29.3 MB

The following NEW packages will be INSTALLED:

  bzip2              anaconda/osx-arm64::bzip2-1.0.8-h80987f9_6 
  ca-certificates    anaconda/osx-arm64::ca-certificates-2024.9.24-hca03da5_0 
  libffi             anaconda/osx-arm64::libffi-3.4.4-hca03da5_1 
  ncurses            anaconda/osx-arm64::ncurses-6.4-h313beb8_0 
  openssl            anaconda/osx-arm64::openssl-3.0.15-h80987f9_0 
  pip                anaconda/osx-arm64::pip-24.2-py310hca03da5_0 
  python             anaconda/osx-arm64::python-3.10.14-hb885b13_1 
  readline           anaconda/osx-arm64::readline-8.2-h1a28f6b_0 
  setuptools         anaconda/osx-arm64::setuptools-75.1.0-py310hca03da5_0 
  sqlite             anaconda/osx-arm64::sqlite-3.45.3-h80987f9_0 
  tk                 anaconda/osx-arm64::tk-8.6.14-h6ba3021_0 
  tzdata             anaconda/noarch::tzdata-2024b-h04d1e81_0 
  wheel              anaconda/osx-arm64::wheel-0.44.0-py310hca03da5_0 
  xz                 anaconda/osx-arm64::xz-5.4.6-h80987f9_1 
  zlib               anaconda/osx-arm64::zlib-1.2.13-h18a0788_1 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - anaconda
Platform: osx-arm64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

# All requested packages already installed.

Channels:
 - anaconda
Platform: osx-arm64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed

LibMambaUnsatisfiableError: Encountered problems while solving:
  - package tensorflow-base-2.10.0-eigen_py38h4111cb8_0 requires python >=3.8,<3.9.0a0, but none of the providers can be installed

Could not solve for environment specs
The following packages are incompatible
├─ python 3.10.14**  is installable and it requires
│  └─ openssl >=3.0.13,<4.0a0 , which can be installed;
└─ tensorflow 2.10.0**  is not installable because there are no viable options
   ├─ tensorflow 2.10.0 would require
   │  └─ tensorflow-base 2.10.0 eigen_py38h4111cb8_0, which requires
   │     └─ python >=3.8,<3.9.0a0 , which conflicts with any installable versions previously reported;
   ├─ tensorflow 2.10.0 would require
   │  └─ tensorflow-base 2.10.0 eigen_py310h4111cb8_0, which requires
   │     └─ openssl >=1.1.1s,<1.1.2a , which conflicts with any installable versions previously reported;
   └─ tensorflow 2.10.0 would require
      └─ tensorflow-base 2.10.0 eigen_py39h4111cb8_0, which requires
         └─ python >=3.9,<3.10.0a0 , which conflicts with any installable versions previously reported.


Quitting from lines 145-150 [unnamed-chunk-9] (pareg.Rmd)
Error: processing vignette 'pareg.Rmd' failed with diagnostics:
one or more Python packages failed to install [error code 1]
--- failed re-building ‘pareg.Rmd’

--- re-building ‘pathway_similarities.Rmd’ using rmarkdown
--- finished re-building ‘pathway_similarities.Rmd’

SUMMARY: processing the following file failed:
  ‘pareg.Rmd’

Error: Vignette re-building failed.
Execution halted