Multiple platform build/check report for BioC 3.20 - CHECK results for graper on merida1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 24.04.1 LTS)	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4743
palomino8	Windows Server 2022 Datacenter	x64	4.4.2 (2024-10-31 ucrt) -- "Pile of Leaves"	4486
merida1	macOS 12.7.5 Monterey	x86_64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4514
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.2 (2024-10-31) -- "Pile of Leaves"	4466
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on merida1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.22.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.22.0.tar.gz

StartedAt: 2024-12-17 04:03:44 -0500 (Tue, 17 Dec 2024)

EndedAt: 2024-12-17 04:05:38 -0500 (Tue, 17 Dec 2024)

EllapsedTime: 113.9 seconds

RetCode: 0

Status: WARNINGS

CheckDir: graper.Rcheck

Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.22.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.2 (2024-10-31)
* using platform: x86_64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.22.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
  /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
  #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
#    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
     ^
1 warning generated.
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.2 (2024-10-31) -- "Pile of Leaves"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-857.728
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-596.753
ELB improved by 260.975

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.734
ELB improved by 60.0189

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.112
ELB improved by 52.6224

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.316
ELB improved by 30.796

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.811
ELB improved by 13.5048

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.833
ELB improved by 6.97748

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.852
ELB improved by 4.9812

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.454
ELB improved by 4.39795

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.996
ELB improved by 4.45867

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.164
ELB improved by 4.83162

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.927
ELB improved by 5.23679

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.548
ELB improved by 5.37943

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.47
ELB improved by 5.07805

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.126
ELB improved by 4.34367

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.811
ELB improved by 3.31474

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.484
ELB improved by 2.3273

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.922
ELB improved by 1.56187

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.88
ELB improved by 1.04188

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.156
ELB improved by 0.724527

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.618
ELB improved by 0.53732

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.194
ELB improved by 0.42409

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.843
ELB improved by 0.351705

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.54
ELB improved by 0.302482

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.273
ELB improved by 0.26734

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.032
ELB improved by 0.241199

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.811
ELB improved by 0.220207

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.611
ELB improved by 0.200916

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.429
ELB improved by 0.181496

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.266
ELB improved by 0.162885

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.119
ELB improved by 0.147385

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.982
ELB improved by 0.136342

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.853
ELB improved by 0.129721

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.726
ELB improved by 0.126985

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.598
ELB improved by 0.127786

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.466
ELB improved by 0.132194

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.325
ELB improved by 0.140724

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.171
ELB improved by 0.154345

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.996
ELB improved by 0.17441

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.794
ELB improved by 0.202301

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.555
ELB improved by 0.238549

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.274
ELB improved by 0.281844

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.944
ELB improved by 0.329631

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.563
ELB improved by 0.38078

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.127
ELB improved by 0.436533

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.629
ELB improved by 0.497723

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.067
ELB improved by 0.562149

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.443
ELB improved by 0.623756

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.77
ELB improved by 0.672897

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-376.072
ELB improved by 0.69849

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-375.379
ELB improved by 0.6922

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.727
ELB improved by 0.652794

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-374.139
ELB improved by 0.587909

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.627
ELB improved by 0.511584

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-373.188
ELB improved by 0.438971

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.807
ELB improved by 0.381344

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.464
ELB improved by 0.342319

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-372.151
ELB improved by 0.313737

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.874
ELB improved by 0.277148

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.65
ELB improved by 0.223893

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.481
ELB improved by 0.168625

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.354
ELB improved by 0.12735

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.251
ELB improved by 0.102617

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.16
ELB improved by 0.0909796

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-371.07
ELB improved by 0.0898862

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.971
ELB improved by 0.098798

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.854
ELB improved by 0.117174

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.714
ELB improved by 0.140216

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.555
ELB improved by 0.158892

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.383
ELB improved by 0.172408

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-370.195
ELB improved by 0.188012

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.998
ELB improved by 0.197231

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.817
ELB improved by 0.180879

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.684
ELB improved by 0.132734

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.61
ELB improved by 0.0739802

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.574
ELB improved by 0.0359026

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.555
ELB improved by 0.0193076

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.542
ELB improved by 0.0123608

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-369.533
ELB improved by 0.00887563

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-868.344
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-540.856
ELB improved by 327.489

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.075
ELB improved by 58.7808

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.137
ELB improved by 29.9379

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.954
ELB improved by 12.1831

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.337
ELB improved by 5.6172

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.072
ELB improved by 3.26424

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.806
ELB improved by 2.26661

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427
ELB improved by 1.80582

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.408
ELB improved by 1.59232

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.898
ELB improved by 1.50926

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.387
ELB improved by 1.51166

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.798
ELB improved by 1.58871

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.053
ELB improved by 1.74454

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.072
ELB improved by 1.98183

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.791
ELB improved by 2.2807

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.213
ELB improved by 2.57784

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.449
ELB improved by 2.76394

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.731
ELB improved by 2.71791

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.343
ELB improved by 2.38824

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.473
ELB improved by 1.8701

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.13
ELB improved by 1.34311

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.204
ELB improved by 0.925359

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.565
ELB improved by 0.639088

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.107
ELB improved by 0.458734

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.756
ELB improved by 0.350116

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.471
ELB improved by 0.285945

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.222
ELB improved by 0.248541

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.994
ELB improved by 0.227809

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.776
ELB improved by 0.218591

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.557
ELB improved by 0.218761

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.329
ELB improved by 0.228136

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.081
ELB improved by 0.247918

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.8
ELB improved by 0.28036

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.472
ELB improved by 0.328279

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.078
ELB improved by 0.39417

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.599
ELB improved by 0.4791

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.017
ELB improved by 0.582328

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.314
ELB improved by 0.702132

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.478
ELB improved by 0.83665

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.494
ELB improved by 0.983364

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.357
ELB improved by 1.13703

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.071
ELB improved by 1.28638

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.66
ELB improved by 1.41095

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.178
ELB improved by 1.48247

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.7
ELB improved by 1.47794

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.298
ELB improved by 1.40211

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.008
ELB improved by 1.28977

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.847
ELB improved by 1.16052

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.848
ELB improved by 0.999168

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.017
ELB improved by 0.830843

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-379.324
ELB improved by 0.692914

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.772
ELB improved by 0.552562

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.371
ELB improved by 0.400566

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-378.086
ELB improved by 0.285404

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.872
ELB improved by 0.213868

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.71
ELB improved by 0.162329

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.592
ELB improved by 0.117697

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.511
ELB improved by 0.08133

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.455
ELB improved by 0.056038

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.414
ELB improved by 0.04021

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.384
ELB improved by 0.0305062

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.36
ELB improved by 0.0243196

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.339
ELB improved by 0.0201237

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.322
ELB improved by 0.0171029

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.307
ELB improved by 0.0148208

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.294
ELB improved by 0.0130327

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.283
ELB improved by 0.011593

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.272
ELB improved by 0.0104091

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-377.263
ELB improved by 0.00941956

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-901.727
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.128
ELB improved by 331.599

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.395
ELB improved by 60.7321

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.808
ELB improved by 35.587

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.001
ELB improved by 15.8075

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.034
ELB improved by 7.96679

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.603
ELB improved by 5.43137

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.904
ELB improved by 4.69856

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.322
ELB improved by 4.5825

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.73
ELB improved by 4.59148

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.312
ELB improved by 4.41812

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.398
ELB improved by 3.91374

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.206
ELB improved by 3.19188

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.676
ELB improved by 2.53066

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.57
ELB improved by 2.10572

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.67
ELB improved by 1.89958

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.924
ELB improved by 1.746

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.438
ELB improved by 1.48613

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.271
ELB improved by 1.16755

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.383
ELB improved by 0.887631

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.688
ELB improved by 0.695121

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.106
ELB improved by 0.581929

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.588
ELB improved by 0.51846

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.105
ELB improved by 0.482197

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.645
ELB improved by 0.46063

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.198
ELB improved by 0.447315

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.759
ELB improved by 0.438974

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.324
ELB improved by 0.434061

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.892
ELB improved by 0.43209

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.459
ELB improved by 0.43326

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.021
ELB improved by 0.438142

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.574
ELB improved by 0.447312

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.113
ELB improved by 0.460846

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.635
ELB improved by 0.47769

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.14
ELB improved by 0.495185

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.631
ELB improved by 0.509405

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.114
ELB improved by 0.516402

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.601
ELB improved by 0.513291

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.102
ELB improved by 0.498452

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.631
ELB improved by 0.471682

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.196
ELB improved by 0.434656

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.805
ELB improved by 0.390868

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.46
ELB improved by 0.344727

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.16
ELB improved by 0.300411

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.899
ELB improved by 0.261076

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.67
ELB improved by 0.228644

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.466
ELB improved by 0.203938

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.28
ELB improved by 0.186816

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.104
ELB improved by 0.176024

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.935
ELB improved by 0.168877

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.773
ELB improved by 0.161718

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.621
ELB improved by 0.152016

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.481
ELB improved by 0.140232

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.352
ELB improved by 0.128951

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.23
ELB improved by 0.121411

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.108
ELB improved by 0.122118

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.971
ELB improved by 0.137619

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.798
ELB improved by 0.17212

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.589
ELB improved by 0.209385

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.383
ELB improved by 0.206192

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.227
ELB improved by 0.156022

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.124
ELB improved by 0.103037

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.055
ELB improved by 0.0687133

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.006
ELB improved by 0.0487886

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.97
ELB improved by 0.0367843

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.94
ELB improved by 0.0290927

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.917
ELB improved by 0.0238972

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.896
ELB improved by 0.0202268

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.879
ELB improved by 0.0175252

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.863
ELB improved by 0.0154564

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.85
ELB improved by 0.0138088

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.837
ELB improved by 0.0124444

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.826
ELB improved by 0.0112718

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.816
ELB improved by 0.0102312

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.806
ELB improved by 0.00928515

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.391
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-595.348
ELB improved by 284.043

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-533.839
ELB improved by 61.5085

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-491.778
ELB improved by 42.0609

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.497
ELB improved by 18.2814

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.658
ELB improved by 6.83923

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.591
ELB improved by 4.06701

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.968
ELB improved by 3.62262

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.129
ELB improved by 3.83947

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.719
ELB improved by 4.40933

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.459
ELB improved by 5.26039

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.264
ELB improved by 6.19523

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.582
ELB improved by 6.68174

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.478
ELB improved by 6.10393

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.874
ELB improved by 4.6037

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.873
ELB improved by 3.00079

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.045
ELB improved by 1.82802

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.923
ELB improved by 1.12231

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.189
ELB improved by 0.734333

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.662
ELB improved by 0.52691

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.247
ELB improved by 0.414739

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.896
ELB improved by 0.350828

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.587
ELB improved by 0.309656

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.308
ELB improved by 0.278839

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.051
ELB improved by 0.256417

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.805
ELB improved by 0.246175

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.556
ELB improved by 0.249426

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.301
ELB improved by 0.254847

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.063
ELB improved by 0.237746

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.87
ELB improved by 0.192684

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.724
ELB improved by 0.146368

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.608
ELB improved by 0.115903

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.509
ELB improved by 0.0987393

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.421
ELB improved by 0.0887193

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.339
ELB improved by 0.0821832

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.261
ELB improved by 0.0774726

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.187
ELB improved by 0.0738696

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.116
ELB improved by 0.0710404

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.047
ELB improved by 0.0688068

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.98
ELB improved by 0.0670586

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.915
ELB improved by 0.0657199

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.85
ELB improved by 0.0647359

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.786
ELB improved by 0.0640659

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.722
ELB improved by 0.0636802

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.659
ELB improved by 0.0635579

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.595
ELB improved by 0.0636852

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.531
ELB improved by 0.0640545

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.466
ELB improved by 0.0646636

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.401
ELB improved by 0.0655142

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.334
ELB improved by 0.0666117

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.266
ELB improved by 0.0679642

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.196
ELB improved by 0.0695817

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.125
ELB improved by 0.0714749

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.051
ELB improved by 0.0736546

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.975
ELB improved by 0.0761301

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.896
ELB improved by 0.0789083

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.814
ELB improved by 0.0819917

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.729
ELB improved by 0.0853774

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.64
ELB improved by 0.0890549

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.547
ELB improved by 0.093005

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.45
ELB improved by 0.0971983

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.348
ELB improved by 0.101595

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.242
ELB improved by 0.106147

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.131
ELB improved by 0.1108

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.016
ELB improved by 0.115501

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.895
ELB improved by 0.120216

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.77
ELB improved by 0.124943

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.641
ELB improved by 0.129753

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.506
ELB improved by 0.134826

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.365
ELB improved by 0.140517

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.218
ELB improved by 0.147403

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.062
ELB improved by 0.156278

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.894
ELB improved by 0.167967

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.711
ELB improved by 0.182793

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.511
ELB improved by 0.199856

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.294
ELB improved by 0.216958

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.062
ELB improved by 0.231768

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.82
ELB improved by 0.242552

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.573
ELB improved by 0.246525

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.336
ELB improved by 0.237373

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.128
ELB improved by 0.208308

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.964
ELB improved by 0.163701

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.844
ELB improved by 0.119498

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.758
ELB improved by 0.0865742

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.693
ELB improved by 0.0651753

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.641
ELB improved by 0.0515935

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.598
ELB improved by 0.0426895

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.562
ELB improved by 0.0365834

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.53
ELB improved by 0.0322244

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.501
ELB improved by 0.028994

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.474
ELB improved by 0.0264905

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.45
ELB improved by 0.0244332

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.427
ELB improved by 0.022623

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.406
ELB improved by 0.02093

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.387
ELB improved by 0.0192845

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.369
ELB improved by 0.0176665

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.353
ELB improved by 0.0160888

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.338
ELB improved by 0.0145795

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.325
ELB improved by 0.0131669

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.313
ELB improved by 0.0118713

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.303
ELB improved by 0.0107025

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.293
ELB improved by 0.00966089

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  4.432   0.449   4.862

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.085	0.042	0.127
getPIPs	0.075	0.038	0.115
graper	0.125	0.051	0.177
makeExampleData	0.018	0.003	0.022
makeExampleDataWithUnequalGroups	0.044	0.004	0.048
plotELBO	0.388	0.039	0.427
plotGroupPenalties	1.656	0.061	1.732
plotPosterior	1.203	0.044	1.272
predict.graper	3.104	0.196	3.424
print.graper	0.073	0.030	0.103