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This page was generated on 2023-01-02 09:00:21 -0500 (Mon, 02 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
palomino5Windows Server 2022 Datacenterx64R Under development (unstable) (2022-12-25 r83502 ucrt) -- "Unsuffered Consequences" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for biomvRCNS on palomino5


To the developers/maintainers of the biomvRCNS package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 192/2158HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomvRCNS 1.39.0  (landing page)
Yang Du
Snapshot Date: 2022-12-28 11:00:06 -0500 (Wed, 28 Dec 2022)
git_url: https://git.bioconductor.org/packages/biomvRCNS
git_branch: master
git_last_commit: 7e36203
git_last_commit_date: 2022-11-01 11:07:53 -0500 (Tue, 01 Nov 2022)
palomino5Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped

Summary

Package: biomvRCNS
Version: 1.39.0
Command: chmod a+r biomvRCNS -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data biomvRCNS
StartedAt: 2022-12-28 16:56:14 -0500 (Wed, 28 Dec 2022)
EndedAt: 2022-12-28 16:56:20 -0500 (Wed, 28 Dec 2022)
EllapsedTime: 6.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r biomvRCNS -R && F:\biocbuild\bbs-3.17-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data biomvRCNS
###
##############################################################################
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* checking for file 'biomvRCNS/DESCRIPTION' ... OK
* preparing 'biomvRCNS':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'biomvRCNS' ...
** using staged installation
** libs
using C compiler: 'gcc.exe (GCC) 12.2.0'
gcc  -I"F:/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG     -I"c:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c biomvRCNS.c -o biomvRCNS.o
biomvRCNS.c: In function 'forward':
biomvRCNS.c:153:43: error: 'DOUBLE_XMIN' undeclared (first use in this function); did you mean 'DBL_MIN'?
  153 |                         m_e(F, t, j, T)+= DOUBLE_XMIN;
      |                                           ^~~~~~~~~~~
      |                                           DBL_MIN
biomvRCNS.c:153:43: note: each undeclared identifier is reported only once for each function it appears in
biomvRCNS.c: In function 'viterbi':
biomvRCNS.c:294:36: error: 'DOUBLE_XMAX' undeclared (first use in this function); did you mean 'DBL_MAX'?
  294 |         double obs, prod, maxprod=-DOUBLE_XMAX;
      |                                    ^~~~~~~~~~~
      |                                    DBL_MAX
biomvRCNS.c: In function 'logviterbi':
biomvRCNS.c:401:36: error: 'DOUBLE_XMAX' undeclared (first use in this function); did you mean 'DBL_MAX'?
  401 |         double obs, prod, maxprod=-DOUBLE_XMAX;
      |                                    ^~~~~~~~~~~
      |                                    DBL_MAX
make: *** [F:/biocbuild/bbs-3.17-bioc/R/etc/x64/Makeconf:257: biomvRCNS.o] Error 1
ERROR: compilation failed for package 'biomvRCNS'
* removing 'F:/biocbuild/bbs-3.17-bioc-rtools43/tmpdir/RtmpYJOTio/Rinst2ce47c3c1a98/biomvRCNS'
      -----------------------------------
ERROR: package installation failed