Ariel Hippen
| Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022) |
| git_url: https://git.bioconductor.org/packages/miQC |
| git_branch: RELEASE_3_15 |
| git_last_commit: cbe88ea |
| git_last_commit_date: 2022-04-26 12:13:33 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-10-19 13:21:50 -0400 (Wed, 19 Oct 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4386 |
| palomino3 | Windows Server 2022 Datacenter | x64 | 4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" | 4138 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | 4.2.1 (2022-06-23) -- "Funny-Looking Kid" | 4205 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the miQC package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/miQC.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1189/2140 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| miQC 1.4.0 (landing page) Ariel Hippen
| nebbiolo1 | Linux (Ubuntu 20.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: miQC |
| Version: 1.4.0 |
| Command: chmod a+r miQC -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data miQC |
| StartedAt: 2022-10-18 19:34:05 -0400 (Tue, 18 Oct 2022) |
| EndedAt: 2022-10-18 19:35:31 -0400 (Tue, 18 Oct 2022) |
| EllapsedTime: 86.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r miQC -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data miQC
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* checking for file 'miQC/DESCRIPTION' ... OK
* preparing 'miQC':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'miQC.Rmd' using rmarkdown
snapshotDate(): 2022-04-26
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
snapshotDate(): 2022-04-26
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
snapshotDate(): 2022-04-26
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
snapshotDate(): 2022-04-26
see ?scRNAseq and browseVignettes('scRNAseq') for documentation
loading from cache
Warning in min(metrics[!metrics$keep, ]$subsets_mito_percent) :
no non-missing arguments to min; returning Inf
Quitting from lines 247-249 (miQC.Rmd)
Error: processing vignette 'miQC.Rmd' failed with diagnostics:
replacement has 1 row, data has 0
--- failed re-building 'miQC.Rmd'
SUMMARY: processing the following file failed:
'miQC.Rmd'
Error: Vignette re-building failed.
Execution halted