Katharina Zirngibl
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/cosmosR |
| git_branch: master |
| git_last_commit: 0360169 |
| git_last_commit_date: 2021-10-26 13:09:43 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:16 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the cosmosR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cosmosR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 408/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| cosmosR 1.3.0 (landing page) Katharina Zirngibl
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: cosmosR |
| Version: 1.3.0 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL cosmosR |
| StartedAt: 2022-03-17 16:04:40 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 16:06:08 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 87.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL cosmosR
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'cosmosR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'cosmosR'
finding HTML links ... done
convert_ensembl_to_entrezid html
convert_genesymbols_to_entrezid html
cosmos_data html
default_CARNIVAL_options html
display_node_neighboorhood html
extract_nodes_for_ORA html
format_COSMOS_res html
gmt_to_dataframe html
load_tf_regulon_dorothea html
load_tf_regulon_dorothea_omnipath html
meta_network html
metabolite_to_pubchem html
omnipath_ptm html
prepare_metabolomics_data html
preprocess_COSMOS_metabolism_to_signaling
html
preprocess_COSMOS_signaling_to_metabolism
html
print.cosmos_data html
run_COSMOS_metabolism_to_signaling html
run_COSMOS_signaling_to_metabolism html
toy_RNA html
toy_metabolic_input html
toy_network html
toy_signaling_input html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cosmosR)
Making 'packages.html' ... done