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This page was generated on 2022-03-18 11:08:28 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for Rgin on riesling1


To the developers/maintainers of the Rgin package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rgin.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1598/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rgin 1.15.1  (landing page)
Hector Climente-Gonzalez
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/Rgin
git_branch: master
git_last_commit: 91e1cb6
git_last_commit_date: 2022-03-14 07:49:27 -0400 (Mon, 14 Mar 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  ERROR    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  ERROR    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: Rgin
Version: 1.15.1
Command: chmod a+r Rgin -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rgin
StartedAt: 2022-03-17 17:52:38 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 17:52:45 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 6.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   chmod a+r Rgin -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rgin
###
##############################################################################
##############################################################################


* checking for file 'Rgin/DESCRIPTION' ... OK
* preparing 'Rgin':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'Rgin' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/RcppEigen/include'   -I"C:/extsoft/include"   -D_LARGEFILE64_SOURCE   -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c Rgin-init.c -o Rgin-init.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/RcppEigen/include'   -I"C:/extsoft/include"  -std=c++11 -fopenmp -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -U_FORTIFY_SOURCE -DBGZF_CACHE -DAS_GINLIB -DAS_RGINLIB -I./include -I./lib `D:/biocbuild/bbs-3.15-bioc/R/bin/Rscript -e "Rcpp:::CxxFlags()"`   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c src/feature_selection/feature_selector.cc -o src/feature_selection/feature_selector.o
In file included from ./include/gin/feature_selection/scones.h:8,
                 from src/feature_selection/feature_selector.cc:9:
./include/gin/globals.h:60:10: fatal error: Rcpp.h: No such file or directory
 #include "Rcpp.h"
          ^~~~~~~~
compilation terminated.
make: *** [Makevars.win:16: src/feature_selection/feature_selector.o] Error 1
ERROR: compilation failed for package 'Rgin'
* removing 'D:/biocbuild/bbs-3.15-bioc/tmpdir/RtmpaIW0tk/Rinst300c61636c0e/Rgin'
      -----------------------------------
ERROR: package installation failed