| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:07:08 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the pulsedSilac package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/pulsedSilac.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1485/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| pulsedSilac 1.8.0 (landing page) Marc Pagès-Gallego
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: pulsedSilac |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pulsedSilac_1.8.0.tar.gz && rm -rf pulsedSilac.buildbin-libdir && mkdir pulsedSilac.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pulsedSilac.buildbin-libdir pulsedSilac_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pulsedSilac_1.8.0.zip && rm pulsedSilac_1.8.0.tar.gz pulsedSilac_1.8.0.zip |
| StartedAt: 2022-04-12 05:40:30 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:42:11 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 101.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/pulsedSilac_1.8.0.tar.gz && rm -rf pulsedSilac.buildbin-libdir && mkdir pulsedSilac.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pulsedSilac.buildbin-libdir pulsedSilac_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL pulsedSilac_1.8.0.zip && rm pulsedSilac_1.8.0.tar.gz pulsedSilac_1.8.0.zip
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
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100 1322k 100 1322k 0 0 911k 0 0:00:01 0:00:01 --:--:-- 911k
install for i386
* installing *source* package 'pulsedSilac' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
in method for 'addMisscleavedPeptides' with signature '"SilacProteinExperiment"': no definition for class "SilacProteinExperiment"
in method for 'addMisscleavedPeptides' with signature '"SilacPeptideExperiment"': no definition for class "SilacPeptideExperiment"
in method for 'addMisscleavedPeptides' with signature '"SilacProteomicsExperiment"': no definition for class "SilacProteomicsExperiment"
** help
*** installing help indices
converting help for package 'pulsedSilac'
finding HTML links ... done
SilacPeptideExperiment-class html
finding level-2 HTML links ... done
SilacPeptideExperiment-constructor html
SilacProteinExperiment-class html
SilacProteinExperiment-constructor html
SilacProteinPeptideExperiment-accessors
html
SilacProteomicsExperiment-accessors html
SilacProteomicsExperiment-class html
SilacProteomicsExperiment-constructor html
addMisscleavedPeptides html
barplotCounts html
barplotTimeCoverage html
buildLinkerDf html
calculateAIC html
calculateIsotopeFraction html
calculateIsotopeRatio html
calculateOldIsotopePool html
compareAIC html
filterByMissingTimepoints html
mefPE html
merge html
mergeModelsLists html
modelTurnover html
mostStable html
plotDistributionAssay html
plotDistributionModel html
plotIndividualModel html
recycleLightLysine html
scatterCompareAssays html
scatterCompareModels html
upsetTimeCoverage html
wormsPE html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'pulsedSilac' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'pulsedSilac' as pulsedSilac_1.8.0.zip
* DONE (pulsedSilac)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'pulsedSilac' successfully unpacked and MD5 sums checked