Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:17 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for cbpManager on tokay2


To the developers/maintainers of the cbpManager package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cbpManager.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 255/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cbpManager 1.2.2  (landing page)
Arsenij Ustjanzew
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/cbpManager
git_branch: RELEASE_3_14
git_last_commit: fd7d9e9
git_last_commit_date: 2021-12-02 07:21:43 -0400 (Thu, 02 Dec 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: cbpManager
Version: 1.2.2
Command: C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch cbpManager
StartedAt: 2022-04-12 07:36:10 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:38:11 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 120.7 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch cbpManager
###
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* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
* installing *source* package 'cbpManager' ...
** using non-staged installation via StagedInstall field
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cbpManager'
    finding HTML links ... done
    IsDate                                  html  
    ValidationDependencies                  html  
    addColumn_Server                        html  
    addColumn_UI                            html  
    addRowRc_Server                         html  
    addRowRc_UI                             html  
    addRow_Server                           html  
    addRow_UI                               html  
    cBioPortalToDataFrame                   html  
    cbpManager-pkg                          html  
    cbpManager                              html  
    check_input_dates                       html  
    convertDataFrame                        html  
    create_name                             html  
    deleteColumn_Server                     html  
    deleteColumn_UI                         html  
    deleteRowRc_Server                      html  
    deleteRowRc_UI                          html  
    deleteRow_Server                        html  
    deleteRow_UI                            html  
    editRowRc_Server                        html  
    editRowRc_UI                            html  
    editRow_Server                          html  
    editRow_UI                              html  
    fncols                                  html  
    generateOncotreeUIwidgets               html  
    generateUIwidgets                       html  
    getSampleIDs                            html  
    importPatientData                       html  
    saveResource_Server                     html  
    saveResource_UI                         html  
    saveTimeline_Server                     html  
    saveTimeline_UI                         html  
    setupConda_cbpManager                   html  
    shinyAppServer                          html  
    shinyAppUI                              html  
    updateOncotreeUIwidgets                 html  
    validateResourceDefinition              html  
    validateResourcePatient                 html  
    validateResourceSample                  html  
    validateResourceStudy                   html  
    writeLogfile                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (cbpManager)
Making 'packages.html' ... done