Rhonda Bacher
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/SCnorm |
| git_branch: RELEASE_3_14 |
| git_last_commit: d9a9166 |
| git_last_commit_date: 2021-10-26 12:36:46 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:19 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the SCnorm package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SCnorm.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1732/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SCnorm 1.16.0 (landing page) Rhonda Bacher
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: SCnorm |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SCnorm_1.16.0.tar.gz && rm -rf SCnorm.buildbin-libdir && mkdir SCnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCnorm.buildbin-libdir SCnorm_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SCnorm_1.16.0.zip && rm SCnorm_1.16.0.tar.gz SCnorm_1.16.0.zip |
| StartedAt: 2022-04-12 05:43:27 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 05:44:26 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 59.8 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SCnorm_1.16.0.tar.gz && rm -rf SCnorm.buildbin-libdir && mkdir SCnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCnorm.buildbin-libdir SCnorm_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SCnorm_1.16.0.zip && rm SCnorm_1.16.0.tar.gz SCnorm_1.16.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
1 2810k 1 36237 0 0 229k 0 0:00:12 --:--:-- 0:00:12 229k
34 2810k 34 975k 0 0 845k 0 0:00:03 0:00:01 0:00:02 845k
98 2810k 98 2773k 0 0 1287k 0 0:00:02 0:00:02 --:--:-- 1287k
100 2810k 100 2810k 0 0 1303k 0 0:00:02 0:00:02 --:--:-- 1303k
install for i386
* installing *source* package 'SCnorm' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SCnorm'
finding HTML links ... done
ExampleSimSCData html
GetTD html
SCnorm html
SCnormFit html
correctWithin html
evaluateK html
generateEvalPlot html
getCounts html
getDens html
getSlopes html
normWrapper html
plotCountDepth html
plotWithinFactor html
quickReg html
redoBox html
results html
scaleNormMultCont html
splitGroups html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SCnorm' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SCnorm' as SCnorm_1.16.0.zip
* DONE (SCnorm)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'SCnorm' successfully unpacked and MD5 sums checked