| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:32:25 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the mygene package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1192/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| mygene 1.26.0 (landing page) Adam Mark, Cyrus Afrasiabi, Chunlei Wu
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: mygene |
| Version: 1.26.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/mygene_1.26.0.tar.gz && rm -rf mygene.buildbin-libdir && mkdir mygene.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mygene.buildbin-libdir mygene_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL mygene_1.26.0.zip && rm mygene_1.26.0.tar.gz mygene_1.26.0.zip |
| StartedAt: 2021-05-05 18:24:03 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:25:21 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 78.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/mygene_1.26.0.tar.gz && rm -rf mygene.buildbin-libdir && mkdir mygene.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=mygene.buildbin-libdir mygene_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL mygene_1.26.0.zip && rm mygene_1.26.0.tar.gz mygene_1.26.0.zip
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install for i386
* installing *source* package 'mygene' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'mygene'
finding HTML links ... done
MyGene-class html
MyGene html
getGene html
getGenes html
makeTxDbFromMyGene html
metadata html
mygene-package html
query html
queryMany html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'mygene' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'mygene' as mygene_1.26.0.zip
* DONE (mygene)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'mygene' successfully unpacked and MD5 sums checked