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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL mgsa
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* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘mgsa’ ...
** using staged installation
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include  -I. -fopenmp -fpic  -g -O2  -Wall -c mgsa-core.c -o mgsa-core.o
mgsa-core.c:796:13: warning: ‘print_context’ defined but not used [-Wunused-function]
 static void print_context(struct context *cn)
             ^~~~~~~~~~~~~
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include  -I. -fopenmp -fpic  -g -O2  -Wall -c mgsa.c -o mgsa.o
gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG   -I/usr/local/include  -I. -fopenmp -fpic  -g -O2  -Wall -c mt.c -o mt.o
gcc -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o mgsa.so mgsa-core.o mgsa.o mt.o -fopenmp -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-mgsa/00new/mgsa/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mgsa)