| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:32:10 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the Melissa package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1036/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Melissa 1.6.0 (landing page) C. A. Kapourani
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: Melissa |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Melissa_1.6.0.tar.gz && rm -rf Melissa.buildbin-libdir && mkdir Melissa.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Melissa.buildbin-libdir Melissa_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Melissa_1.6.0.zip && rm Melissa_1.6.0.tar.gz Melissa_1.6.0.zip |
| StartedAt: 2021-05-05 19:13:58 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:15:59 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 120.8 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Melissa_1.6.0.tar.gz && rm -rf Melissa.buildbin-libdir && mkdir Melissa.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Melissa.buildbin-libdir Melissa_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Melissa_1.6.0.zip && rm Melissa_1.6.0.tar.gz Melissa_1.6.0.zip
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install for i386
* installing *source* package 'Melissa' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
converting help for package 'Melissa'
finding HTML links ... done
Melissa html
binarise_files html
cluster_ari html
cluster_error html
create_melissa_data_obj html
eval_cluster_performance html
eval_imputation_performance html
extract_y html
filter_regions html
impute_met_files html
impute_test_met html
init_design_matrix html
log_sum_exp html
melissa_encode_dt html
melissa_gibbs html
melissa_synth_dt html
melissa_vb html
partition_dataset html
plot_melissa_profiles html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Melissa' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'Melissa' as Melissa_1.6.0.zip
* DONE (Melissa)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'Melissa' successfully unpacked and MD5 sums checked