Federico Marini
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/GeneTonic |
| Branch: RELEASE_3_12 |
| Last Commit: 6b41744 |
| Last Changed Date: 2020-10-27 11:53:11 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:27 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the GeneTonic package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 705/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GeneTonic 1.2.0 (landing page) Federico Marini
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: GeneTonic |
| Version: 1.2.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GeneTonic_1.2.0.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.2.0.zip && rm GeneTonic_1.2.0.tar.gz GeneTonic_1.2.0.zip |
| StartedAt: 2021-05-05 18:39:58 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:41:22 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 84.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GeneTonic_1.2.0.tar.gz && rm -rf GeneTonic.buildbin-libdir && mkdir GeneTonic.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GeneTonic.buildbin-libdir GeneTonic_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GeneTonic_1.2.0.zip && rm GeneTonic_1.2.0.tar.gz GeneTonic_1.2.0.zip
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install for i386
* installing *source* package 'GeneTonic' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GeneTonic'
finding HTML links ... done
GeneTonic-pkg html
GeneTonic html
check_colors html
checkup_GeneTonic html
cluster_markov html
create_jaccard_matrix html
create_kappa_matrix html
deseqresult2df html
distill_enrichment html
dot-check_pandoc html
enhance_table html
enrichment_map html
enrichr_output_macrophage html
export_for_iSEE html
finding level-2 HTML links ... done
export_to_sif html
fgseaRes html
gene_plot html
geneinfo_2_html html
get_aggrscores html
get_expression_values html
ggs_graph html
go_2_html html
gostres_macrophage html
gs_alluvial html
gs_dendro html
gs_heatmap html
gs_horizon html
gs_mds html
gs_radar html
gs_scores html
gs_scoresheat html
gs_simplify html
gs_summary_heat html
gs_summary_overview html
gs_summary_overview_pair html
gs_volcano html
happy_hour html
map2color html
overlap_coefficient html
overlap_jaccard_index html
res_macrophage_IFNg_vs_naive html
shake_davidResult html
shake_enrichResult html
shake_enrichrResult html
shake_fgseaResult html
shake_gprofilerResult html
shake_topGOtableResult html
styleColorBar_divergent html
topgoDE_macrophage_IFNg_vs_naive html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GeneTonic' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GeneTonic' as GeneTonic_1.2.0.zip
* DONE (GeneTonic)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'GeneTonic' successfully unpacked and MD5 sums checked