Solaiappan Manimaran
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/BatchQC |
| Branch: RELEASE_3_12 |
| Last Commit: 448a06a |
| Last Changed Date: 2020-10-27 11:13:48 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:29:58 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the BatchQC package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 124/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BatchQC 1.18.0 (landing page) Solaiappan Manimaran
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: BatchQC |
| Version: 1.18.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/BatchQC_1.18.0.tar.gz && rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BatchQC.buildbin-libdir BatchQC_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BatchQC_1.18.0.zip && rm BatchQC_1.18.0.tar.gz BatchQC_1.18.0.zip |
| StartedAt: 2021-05-05 18:39:11 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:40:48 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 96.7 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/BatchQC_1.18.0.tar.gz && rm -rf BatchQC.buildbin-libdir && mkdir BatchQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BatchQC.buildbin-libdir BatchQC_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BatchQC_1.18.0.zip && rm BatchQC_1.18.0.tar.gz BatchQC_1.18.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1263k 100 1263k 0 0 36.8M 0 --:--:-- --:--:-- --:--:-- 38.5M
install for i386
* installing *source* package 'BatchQC' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
converting help for package 'BatchQC'
finding HTML links ... done
BatchQCout-class html
batchQC html
batchQC_analyze html
batchQC_condition_adjusted html
batchQC_filter_genes html
batchQC_fsva_adjusted html
batchQC_num.sv html
batchQC_shapeVariation html
batchQC_sva html
batchQC_svregress_adjusted html
batchqc_circosplot html
batchqc_correlation html
batchqc_corscatter html
batchqc_explained_variation html
batchqc_heatmap html
batchqc_pc_explained_variation html
batchqc_pca html
batchqc_pca_svd html
batchtest html
combatPlot html
example_batchqc_data html
getShinyInput html
getShinyInputCombat html
getShinyInputOrig html
getShinyInputSVA html
getShinyInputSVAf html
getShinyInputSVAr html
gnormalize html
lmFitC html
log2CPM html
makeSVD html
pcRes html
plotPC html
plot_genewise_moments html
plot_samplewise_moments html
protein_example_data html
rnaseq_sim html
setShinyInput html
setShinyInputCombat html
setShinyInputOrig html
setShinyInputSVA html
setShinyInputSVAf html
setShinyInputSVAr html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BatchQC' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'BatchQC' as BatchQC_1.18.0.zip
* DONE (BatchQC)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'BatchQC' successfully unpacked and MD5 sums checked