Leonardo Collado-Torres
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/recount3 |
| Branch: RELEASE_3_12 |
| Last Commit: 66048cf |
| Last Changed Date: 2021-02-10 16:20:59 -0400 (Wed, 10 Feb 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:10 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the recount3 package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1490/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| recount3 1.0.7 (landing page) Leonardo Collado-Torres
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: recount3 |
| Version: 1.0.7 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/recount3_1.0.7.tar.gz && rm -rf recount3.buildbin-libdir && mkdir recount3.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount3.buildbin-libdir recount3_1.0.7.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL recount3_1.0.7.zip && rm recount3_1.0.7.tar.gz recount3_1.0.7.zip |
| StartedAt: 2021-05-05 18:03:03 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:03:51 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 48.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/recount3_1.0.7.tar.gz && rm -rf recount3.buildbin-libdir && mkdir recount3.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount3.buildbin-libdir recount3_1.0.7.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL recount3_1.0.7.zip && rm recount3_1.0.7.tar.gz recount3_1.0.7.zip
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install for i386
* installing *source* package 'recount3' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'recount3'
finding HTML links ... done
annotation_ext html
annotation_options html
available_projects html
available_samples html
compute_read_counts html
compute_scale_factors html
create_rse html
create_rse_manual html
expand_sra_attributes html
file_retrieve html
is_paired_end html
locate_url html
locate_url_ann html
project_homes html
read_counts html
read_metadata html
recount3-package html
recount3_cache html
recount3_cache_files html
recount3_cache_rm html
transform_counts html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'recount3' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'recount3' as recount3_1.0.7.zip
* DONE (recount3)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'recount3' successfully unpacked and MD5 sums checked