Xiaoyuan Zhou
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/eegc |
| Branch: RELEASE_3_12 |
| Last Commit: 8e13c5e |
| Last Changed Date: 2020-10-27 11:17:14 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:01 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the eegc package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 534/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| eegc 1.16.0 (landing page) Xiaoyuan Zhou
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: eegc |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/eegc_1.16.0.tar.gz && rm -rf eegc.buildbin-libdir && mkdir eegc.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=eegc.buildbin-libdir eegc_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL eegc_1.16.0.zip && rm eegc_1.16.0.tar.gz eegc_1.16.0.zip |
| StartedAt: 2021-05-05 19:04:37 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:06:07 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 90.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/eegc_1.16.0.tar.gz && rm -rf eegc.buildbin-libdir && mkdir eegc.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=eegc.buildbin-libdir eegc_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL eegc_1.16.0.zip && rm eegc_1.16.0.tar.gz eegc_1.16.0.zip
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install for i386
* installing *source* package 'eegc' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'eegc'
finding HTML links ... done
SandlerFPKM html
barplotEnrich html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/barplotEnrich.Rd:29: missing file link 'barplot.enrichResult'
cate.gene html
cate.ratio html
categorizeGene html
densityPlot html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/densityPlot.Rd:29: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
diffGene html
diffgene.genes html
dotPercentage html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/dotPercentage.Rd:32: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
eegc html
enrichment html
expr.filter html
functionEnrich html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/functionEnrich.Rd:17: file link 'org.Hs.eg.db' in package 'org.Hs.eg.db' does not exist and so has been treated as a topic
goenrich html
grnPlot html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/grnPlot.Rd:33: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/grnPlot.Rd:36: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/grnPlot.Rd:38: file link 'layout' in package 'igraph' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/grnPlot.Rd:42: file link 'igraph.plotting' in package 'igraph' does not exist and so has been treated as a topic
heatmapPlot html
human.gene html
human.grn html
human.tf html
markerScatter html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpc16XuB/R.INSTALL261824642bb6/eegc/man/markerScatter.Rd:30: file link 'plot' in package 'graphics' does not exist and so has been treated as a topic
markers html
mouse.gene html
mouse.grn html
mouse.tf html
networkAnalyze html
tissueGenes html
tissueGroup html
** building package indices
** installing vignettes
'eegc.Rnw'
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'eegc' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'eegc' as eegc_1.16.0.zip
* DONE (eegc)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'eegc' successfully unpacked and MD5 sums checked