Colin A. Smith
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/annaffy |
| Branch: RELEASE_3_12 |
| Last Commit: ad9c37e |
| Last Changed Date: 2020-10-27 10:22:41 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:29:53 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the annaffy package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 59/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| annaffy 1.62.0 (landing page) Colin A. Smith
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: annaffy |
| Version: 1.62.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/annaffy_1.62.0.tar.gz && rm -rf annaffy.buildbin-libdir && mkdir annaffy.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annaffy.buildbin-libdir annaffy_1.62.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL annaffy_1.62.0.zip && rm annaffy_1.62.0.tar.gz annaffy_1.62.0.zip |
| StartedAt: 2021-05-05 17:18:23 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:19:42 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 78.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/annaffy_1.62.0.tar.gz && rm -rf annaffy.buildbin-libdir && mkdir annaffy.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=annaffy.buildbin-libdir annaffy_1.62.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL annaffy_1.62.0.zip && rm annaffy_1.62.0.tar.gz annaffy_1.62.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 71189 100 71189 0 0 5229k 0 --:--:-- --:--:-- --:--:-- 5793k
install for i386
* installing *source* package 'annaffy' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
Warning message:
Package 'KEGG.db' is deprecated and will be removed from Bioconductor
version 3.12
** help
*** installing help indices
converting help for package 'annaffy'
finding HTML links ... done
aaf.character html
aaf.goterm html
aaf.handler html
aaf.integer html
aaf.raw html
aafChromLoc-class html
aafChromLoc html
aafChromosome-class html
aafChromosome html
aafCytoband-class html
aafCytoband html
aafDescription-class html
aafDescription html
aafExpr html
aafGO-class html
aafGO html
aafGOItem-class html
aafGenBank-class html
aafGenBank html
aafIntensity-class html
aafList-class html
aafLocusLink-class html
aafLocusLink html
aafPathway-class html
aafPathway html
aafPathwayItem-class html
aafProbe-class html
aafProbe html
aafPubMed-class html
aafPubMed html
aafSearchGO html
aafSearchText html
aafSigned-class html
aafSymbol-class html
aafSymbol html
aafTable-class html
aafTable html
aafTableAnn html
aafTableFrame html
aafTableInt html
aafUniGene-class html
aafUniGene html
chkPkgs html
getCSS-methods html
getHTML-methods html
getTD-methods html
getText-methods html
getURL-methods html
is.annpkg html
selectorWidget html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
version 3.12
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'annaffy' ...
** testing if installed package can be loaded
Warning: Package 'KEGG.db' is deprecated and will be removed from Bioconductor
version 3.12
* MD5 sums
packaged installation of 'annaffy' as annaffy_1.62.0.zip
* DONE (annaffy)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'annaffy' successfully unpacked and MD5 sums checked