VJ Carey
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/HumanTranscriptomeCompendium |
| Branch: RELEASE_3_12 |
| Last Commit: 36303f1 |
| Last Changed Date: 2020-10-27 11:45:21 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:47 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the HumanTranscriptomeCompendium package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 852/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HumanTranscriptomeCompendium 1.6.0 (landing page) VJ Carey
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: HumanTranscriptomeCompendium |
| Version: 1.6.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/HumanTranscriptomeCompendium_1.6.0.tar.gz && rm -rf HumanTranscriptomeCompendium.buildbin-libdir && mkdir HumanTranscriptomeCompendium.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HumanTranscriptomeCompendium.buildbin-libdir HumanTranscriptomeCompendium_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL HumanTranscriptomeCompendium_1.6.0.zip && rm HumanTranscriptomeCompendium_1.6.0.tar.gz HumanTranscriptomeCompendium_1.6.0.zip |
| StartedAt: 2021-05-05 17:43:03 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:43:53 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 50.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/HumanTranscriptomeCompendium_1.6.0.tar.gz && rm -rf HumanTranscriptomeCompendium.buildbin-libdir && mkdir HumanTranscriptomeCompendium.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HumanTranscriptomeCompendium.buildbin-libdir HumanTranscriptomeCompendium_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL HumanTranscriptomeCompendium_1.6.0.zip && rm HumanTranscriptomeCompendium_1.6.0.tar.gz HumanTranscriptomeCompendium_1.6.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2159k 100 2159k 0 0 34.6M 0 --:--:-- --:--:-- --:--:-- 35.1M
install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'HumanTranscriptomeCompendium/vignettes/htxcomp.Rmd' to 'HumanTranscriptomeCompendium/README.md'
* installing *source* package 'HumanTranscriptomeCompendium' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'HumanTranscriptomeCompendium'
finding HTML links ... done
HumanTranscriptomeCompendium.colnames html
addRD html
ca43k html
get_ds4841 html
htx_app html
htx_load html
htx_query_by_study_accession html
htx_query_by_text html
load_bigrnaFiles html
load_experTable html
load_studTable html
path_doc4842 html
procExpToGene html
tx2gene_gencode27 html
uniqueAcc_120518 html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'HumanTranscriptomeCompendium/vignettes/htxcomp.Rmd' to 'HumanTranscriptomeCompendium/README.md'
* installing *source* package 'HumanTranscriptomeCompendium' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HumanTranscriptomeCompendium' as HumanTranscriptomeCompendium_1.6.0.zip
* DONE (HumanTranscriptomeCompendium)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'HumanTranscriptomeCompendium' successfully unpacked and MD5 sums checked