Jack Zhu
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/GEOmetadb |
| Branch: RELEASE_3_12 |
| Last Commit: 88673b4 |
| Last Changed Date: 2020-10-27 10:33:08 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:29 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the GEOmetadb package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 728/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GEOmetadb 1.52.0 (landing page) Jack Zhu
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: GEOmetadb |
| Version: 1.52.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GEOmetadb_1.52.0.tar.gz && rm -rf GEOmetadb.buildbin-libdir && mkdir GEOmetadb.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEOmetadb.buildbin-libdir GEOmetadb_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GEOmetadb_1.52.0.zip && rm GEOmetadb_1.52.0.tar.gz GEOmetadb_1.52.0.zip |
| StartedAt: 2021-05-05 19:02:24 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:02:53 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 29.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GEOmetadb_1.52.0.tar.gz && rm -rf GEOmetadb.buildbin-libdir && mkdir GEOmetadb.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GEOmetadb.buildbin-libdir GEOmetadb_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GEOmetadb_1.52.0.zip && rm GEOmetadb_1.52.0.tar.gz GEOmetadb_1.52.0.zip
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install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'GEOmetadb/vignettes/GEOmetadb.Rmd' to 'GEOmetadb/README.md'
* installing *source* package 'GEOmetadb' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GEOmetadb'
finding HTML links ... done
GEOmetadb-package html
columnDescriptions html
geoConvert html
getBiocPlatformMap html
getSQLiteFile html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
failed to copy 'GEOmetadb/vignettes/GEOmetadb.Rmd' to 'GEOmetadb/README.md'
* installing *source* package 'GEOmetadb' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GEOmetadb' as GEOmetadb_1.52.0.zip
* DONE (GEOmetadb)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'GEOmetadb' successfully unpacked and MD5 sums checked