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This page was generated on 2021-05-06 12:34:52 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the EDDA package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 531/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| EDDA 1.28.0 (landing page) Chia Kuan Hui Burton
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
| Package: EDDA |
| Version: 1.28.0 |
| Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL EDDA |
| StartedAt: 2021-05-05 17:23:31 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:24:18 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 47.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL EDDA
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library’
* installing *source* package ‘EDDA’ ...
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include' -I/usr/local/include -fPIC -Wall -g -O2 -c cuffdiff.cpp -o cuffdiff.o
In file included from cuffdiff.cpp:1:
In file included from ./cuffdiff.h:4:
In file included from /Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include/Rcpp.h:57:
/Library/Frameworks/R.framework/Versions/4.0/Resources/library/Rcpp/include/Rcpp/DataFrame.h:136:18: warning: unused variable 'data' [-Wunused-variable]
SEXP data = Parent::get__();
^
1 warning generated.
clang++ -mmacosx-version-min=10.13 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o EDDA.so cuffdiff.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.0/Resources/library/00LOCK-EDDA/00new/EDDA/libs
** R
** data
** byte-compile and prepare package for lazy loading
Warning message:
Package 'DESeq' is deprecated and will be removed from Bioconductor
version 3.13. Please use DESeq2
No methods found in package ‘baySeq’ for request: ‘rbind’ when loading ‘EDDA’
Note: possible error in 'exactTestByDeviance(y1, ': unused argument (big.count = big.count)
Note: possible error in 'exactTestBySmallP(y1, ': unused argument (big.count = big.count)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'DESeq' is deprecated and will be removed from Bioconductor
version 3.13. Please use DESeq2
No methods found in package ‘baySeq’ for request: ‘rbind’ when loading ‘EDDA’
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning: Package 'DESeq' is deprecated and will be removed from Bioconductor
version 3.13. Please use DESeq2
No methods found in package ‘baySeq’ for request: ‘rbind’ when loading ‘EDDA’
** testing if installed package keeps a record of temporary installation path
* DONE (EDDA)