Dennis Wylie
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/sarks |
| Branch: RELEASE_3_11 |
| Last Commit: 8e91544 |
| Last Changed Date: 2020-04-27 15:34:35 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:44 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE sarks PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1575/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| sarks 1.0.0 Dennis Wylie
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: sarks |
| Version: 1.0.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/sarks_1.0.0.tar.gz && rm -rf sarks.buildbin-libdir && mkdir sarks.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sarks.buildbin-libdir sarks_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL sarks_1.0.0.zip && rm sarks_1.0.0.tar.gz sarks_1.0.0.zip |
| StartedAt: 2020-10-16 17:25:10 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 17:26:02 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 52.2 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/sarks_1.0.0.tar.gz && rm -rf sarks.buildbin-libdir && mkdir sarks.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sarks.buildbin-libdir sarks_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL sarks_1.0.0.zip && rm sarks_1.0.0.tar.gz sarks_1.0.0.zip
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install for i386
Warning in untar2(tarfile, files, list, exdir, restore_times) :
restoring symbolic link as a file copy
* installing *source* package 'sarks' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'sarks'
finding HTML links ... done
Sarks html
blockInfo html
blockScores html
clusterCounts html
clusterKmers html
estimateFalsePositiveRate html
extendKmers html
kmerCounts html
kmerPeaks html
locateClusters html
locateKmers html
mergedKmerSubPeaks html
permutationDistribution html
permutationThresholds html
pruneIntervals html
regexCounts html
regexLocate html
sarksFilters html
simulatedScores html
simulatedSeqs html
sourceBlock html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
Warning in untar2(tarfile, files, list, exdir, restore_times) :
restoring symbolic link as a file copy
* installing *source* package 'sarks' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sarks' as sarks_1.0.0.zip
* DONE (sarks)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'sarks' successfully unpacked and MD5 sums checked