Leonardo Collado-Torres
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |
| URL: https://git.bioconductor.org/packages/recount |
| Branch: RELEASE_3_11 |
| Last Commit: 2e32c13 |
| Last Changed Date: 2020-04-27 15:00:09 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-10-17 11:57:35 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE recount PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1453/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| recount 1.14.0 Leonardo Collado-Torres
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: recount |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/recount_1.14.0.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL recount_1.14.0.zip && rm recount_1.14.0.tar.gz recount_1.14.0.zip |
| StartedAt: 2020-10-16 19:25:30 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 19:27:15 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 104.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/recount_1.14.0.tar.gz && rm -rf recount.buildbin-libdir && mkdir recount.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount.buildbin-libdir recount_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL recount_1.14.0.zip && rm recount_1.14.0.tar.gz recount_1.14.0.zip
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install for i386
* installing *source* package 'recount' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'recount'
finding HTML links ... done
abstract_search html
add_metadata html
add_predictions html
all_metadata html
browse_study html
coverage_matrix html
download_retry html
download_study html
expressed_regions html
find_geo html
geo_characteristics html
geo_info html
getRPKM html
getTPM html
read_counts html
recount-package html
recount_abstract html
recount_exons html
recount_genes html
recount_url html
reproduce_ranges html
rse_gene_SRP009615 html
scale_counts html
snaptron_query html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'recount' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'recount' as recount_1.14.0.zip
* DONE (recount)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'recount' successfully unpacked and MD5 sums checked