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INSTALL report for proteoQC on tokay2

This page was generated on 2020-10-17 11:57:29 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE proteoQC PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1370/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
proteoQC 1.24.0
Bo Wen
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/proteoQC
Branch: RELEASE_3_11
Last Commit: 5cce0ed
Last Changed Date: 2020-04-27 14:40:51 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] ERROR  skipped  skipped 
machv2 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: proteoQC
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/proteoQC_1.24.0.tar.gz && rm -rf proteoQC.buildbin-libdir && mkdir proteoQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=proteoQC.buildbin-libdir proteoQC_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL proteoQC_1.24.0.zip && rm proteoQC_1.24.0.tar.gz proteoQC_1.24.0.zip
StartedAt: 2020-10-16 18:47:28 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 18:48:23 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 55.7 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/proteoQC_1.24.0.tar.gz && rm -rf proteoQC.buildbin-libdir && mkdir proteoQC.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=proteoQC.buildbin-libdir proteoQC_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL proteoQC_1.24.0.zip && rm proteoQC_1.24.0.tar.gz proteoQC_1.24.0.zip
###
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100 4556k  100 4556k    0     0  42.4M      0 --:--:-- --:--:-- --:--:-- 45.4M

install for i386

* installing *source* package 'proteoQC' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'proteoQC'
    finding HTML links ... done
    addSummaryChart                         html  
    calcMSQCMetrics                         html  
    chargeStat                              html  
    cntStat                                 html  
    combineRun                              html  
    createTargetDecoyDB                     html  
    getEnzyme                               html  
    getMods                                 html  
    labelRatio                              html  
    loadmsQCres                             html  
    msQCpipe                                html  
    plotBioRepVenn                          html  
    plotFractionIDResult                    html  
    plotMS1Error                            html  
    plotMS2Error                            html  
    plotMS2Error_obsolete                   html  
    plotSampleIDResultErrorBar              html  
    plotSampleVenn                          html  
    plotTechRepVenn                         html  
    print.msQCres                           html  
    proteinGroup                            html  
    reportHTML                              html  
    runTandem                               html  
    showEnzyme                              html  
    showMods                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'proteoQC' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package can be loaded from final location
Warning: Package 'proteoQC' is deprecated and will be removed from Bioconductor
  version 3.12
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'proteoQC' ...
** testing if installed package can be loaded
Warning: Package 'proteoQC' is deprecated and will be removed from Bioconductor
  version 3.12
* MD5 sums
packaged installation of 'proteoQC' as proteoQC_1.24.0.zip
* DONE (proteoQC)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'proteoQC' successfully unpacked and MD5 sums checked