| Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:44 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE SBGNview PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1577/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SBGNview 1.2.0 Xiaoxi Dong
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK |
| Package: SBGNview |
| Version: 1.2.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SBGNview_1.2.0.tar.gz && rm -rf SBGNview.buildbin-libdir && mkdir SBGNview.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.buildbin-libdir SBGNview_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SBGNview_1.2.0.zip && rm SBGNview_1.2.0.tar.gz SBGNview_1.2.0.zip |
| StartedAt: 2020-10-16 17:59:37 -0400 (Fri, 16 Oct 2020) |
| EndedAt: 2020-10-16 18:00:58 -0400 (Fri, 16 Oct 2020) |
| EllapsedTime: 80.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/SBGNview_1.2.0.tar.gz && rm -rf SBGNview.buildbin-libdir && mkdir SBGNview.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SBGNview.buildbin-libdir SBGNview_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL SBGNview_1.2.0.zip && rm SBGNview_1.2.0.tar.gz SBGNview_1.2.0.zip
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install for i386
* installing *source* package 'SBGNview' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SBGNview'
finding HTML links ... done
SBGNview html
SBGNview.obj html
arc-class html
changeDataId html
changeIds html
downloadSbgnFile html
findPathways html
getMolList html
glyph-class html
highlightArcs html
highlightNodes html
highlightPath html
loadMappingTable html
mapped.ids html
outputFile-set html
outputFile html
pathways.info html
pathways.stat html
plus-.SBGNview html
print.SBGNview html
renderSbgn html
sbgnNodes html
spline.arc-class html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SBGNview' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SBGNview' as SBGNview_1.2.0.zip
* DONE (SBGNview)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'SBGNview' successfully unpacked and MD5 sums checked