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BUILD BIN report for MSGFplus on tokay2

This page was generated on 2020-10-17 11:57:12 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE MSGFplus PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1138/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MSGFplus 1.22.0
Thomas Lin Pedersen
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/MSGFplus
Branch: RELEASE_3_11
Last Commit: 4504509
Last Changed Date: 2020-10-07 04:05:57 -0400 (Wed, 07 Oct 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
machv2 macOS 10.14.6 Mojave / x86_64  ERROR  ERROR  skipped  skipped 

Summary

Package: MSGFplus
Version: 1.22.0
Command: rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSGFplus.buildbin-libdir MSGFplus_1.22.0.tar.gz
StartedAt: 2020-10-17 11:05:27 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:06:01 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 33.7 seconds
RetCode: 0
Status:  OK  
PackageFile: MSGFplus_1.22.0.zip
PackageFileSize: 379.8 KiB

Command output

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###
### Running command:
###
###   rm -rf MSGFplus.buildbin-libdir && mkdir MSGFplus.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSGFplus.buildbin-libdir MSGFplus_1.22.0.tar.gz
###
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install for i386

* installing *source* package 'MSGFplus' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MSGFplus'
    finding HTML links ... done
    MSGFplus-package                        html  
    chargeRange                             html  
    db                                      html  
    enzyme                                  html  
    fragmentation                           html  
    getMSGFpar                              html  
    instrument                              html  
    isotopeError                            html  
    lengthRange                             html  
    matches                                 html  
    mods                                    html  
    msgfAsync-class                         html  
    msgfPar-class                           html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpGYyqss/R.INSTALL277c11c4177e/MSGFplus/man/msgfPar-class.Rd:121: missing link 'msgfParGUI'
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpGYyqss/R.INSTALL277c11c4177e/MSGFplus/man/msgfPar-class.Rd:148: missing link 'msgfParGUI'
    msgfPar                                 html  
    msgfParChargeRange-class                html  
    msgfParEnzyme-class                     html  
    msgfParFragmentation-class              html  
    msgfParFromID                           html  
    msgfParInstrument-class                 html  
    msgfParIsotopeError-class               html  
    msgfParLengthRange-class                html  
    msgfParMatches-class                    html  
    msgfParModification-class               html  
    msgfParModificationList-class           html  
    msgfParNtt-class                        html  
    msgfParProtocol-class                   html  
    msgfParTda-class                        html  
    msgfParTolerance-class                  html  
    ntt                                     html  
    protocol                                html  
    runMSGF                                 html  
    tda                                     html  
    tolerance                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MSGFplus' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSGFplus' as MSGFplus_1.22.0.zip
* DONE (MSGFplus)