##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/GOexpress_1.22.0.tar.gz && rm -rf GOexpress.buildbin-libdir && mkdir GOexpress.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GOexpress.buildbin-libdir GOexpress_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL GOexpress_1.22.0.zip && rm GOexpress_1.22.0.tar.gz GOexpress_1.22.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1951k  100 1951k    0     0  20.1M      0 --:--:-- --:--:-- --:--:-- 21.6M

install for i386

* installing *source* package 'GOexpress' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'GOexpress'
    finding HTML links ... done
    AlvMac                                  html  
    AlvMac_GOgenes                          html  
    AlvMac_allGO                            html  
    AlvMac_allgenes                         html  
    AlvMac_results                          html  
    AlvMac_results.pVal                     html  
    GO_analyse                              html  
    GOexpress-package                       html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/GOexpress-package.Rd:100: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/GOexpress-package.Rd:102: file link 'RColorBrewer' in package 'RColorBrewer' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/GOexpress-package.Rd:103: file link 'VennDiagram' in package 'VennDiagram' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/GOexpress-package.Rd:109: file link 'bluered' in package 'gplots' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/GOexpress-package.Rd:110: file link 'greenred' in package 'gplots' does not exist and so has been treated as a topic
    cluster_GO                              html  
    expression_plot                         html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/expression_plot.Rd:140: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    expression_plot_symbol                  html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/expression_plot_symbol.Rd:152: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    expression_profiles                     html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/expression_profiles.Rd:154: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    expression_profiles_symbol              html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/expression_profiles_symbol.Rd:161: file link 'Biobase' in package 'Biobase' does not exist and so has been treated as a topic
    heatmap_GO                              html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/heatmap_GO.Rd:139: file link 'brewer.pal.info' in package 'RColorBrewer' does not exist and so has been treated as a topic
    hist_scores                             html  
    list_genes                              html  
    microarray2dataset                      html  
    pValue_GO                               html  
    plot_design                             html  
    prefix2dataset                          html  
    quantiles_scores                        html  
    rerank                                  html  
    subEset                                 html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmp0CRRhK/R.INSTALLe804a9c4870/GOexpress/man/subEset.Rd:46: file link 'ExpressionSet' in package 'Biobase' does not exist and so has been treated as a topic
    subset_scores                           html  
    table_genes                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'GOexpress' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GOexpress' as GOexpress_1.22.0.zip
* DONE (GOexpress)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'GOexpress' successfully unpacked and MD5 sums checked