This page was generated on 2020-10-17 11:54:23 -0400 (Sat, 17 Oct 2020).
ArrayTV 1.26.0 Eitan Halper-Stromberg
 
| Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020) |  
| URL: https://git.bioconductor.org/packages/ArrayTV |  
| Branch: RELEASE_3_11 |  
| Last Commit: 7b47684 |  
| Last Changed Date: 2020-04-27 14:36:23 -0400 (Mon, 27 Apr 2020) |  
 
 | malbec2  | Linux (Ubuntu 18.04.4 LTS) / x86_64  |  OK  | [ ERROR ] |  skipped  |  |  | 
| tokay2  | Windows Server 2012 R2 Standard / x64  |  OK  |  ERROR  |  skipped  |  skipped  |  | 
| machv2  | macOS 10.14.6 Mojave / x86_64  |  OK  |  ERROR  |  skipped  |  skipped  |  | 
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### Running command:
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###   /home/biocbuild/bbs-3.11-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ArrayTV
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* checking for file ‘ArrayTV/DESCRIPTION’ ... OK
* preparing ‘ArrayTV’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ArrayTV.Rnw’ using Sweave
Loading required package: doParallel
Loading required package: foreach
Loading required package: iterators
Loading required package: parallel
Loading required package: BSgenome
Loading required package: BiocGenerics
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
    clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
    clusterExport, clusterMap, parApply, parCapply, parLapply,
    parLapplyLB, parRapply, parSapply, parSapplyLB
The following objects are masked from ‘package:stats’:
    IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
    Filter, Find, Map, Position, Reduce, anyDuplicated,
    append, as.data.frame, basename, cbind, colnames, dirname,
    do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit, which, which.max, which.min
Loading required package: S4Vectors
Loading required package: stats4
Attaching package: ‘S4Vectors’
The following object is masked from ‘package:base’:
    expand.grid
Loading required package: IRanges
Loading required package: GenomeInfoDb
Loading required package: GenomicRanges
Loading required package: Biostrings
Loading required package: XVector
Attaching package: ‘Biostrings’
The following object is masked from ‘package:base’:
    strsplit
Loading required package: rtracklayer
Error: processing vignette 'ArrayTV.Rnw' failed with diagnostics:
 chunk 6 (label = tvscorefig) 
Error in plot.xy(xy, type, ...) : invalid color name 'NimbleGen'
--- failed re-building ‘ArrayTV.Rnw’
SUMMARY: processing the following file failed:
  ‘ArrayTV.Rnw’
Error: Vignette re-building failed.
Execution halted