Package: unifiedWMWqPCR

Version: 1.22.0

Command: C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:unifiedWMWqPCR.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings unifiedWMWqPCR_1.22.0.tar.gz

StartedAt: 2020-04-15 07:19:03 -0400 (Wed, 15 Apr 2020)

EndedAt: 2020-04-15 07:20:11 -0400 (Wed, 15 Apr 2020)

EllapsedTime: 67.9 seconds

RetCode: 0

Status:  WARNINGS

CheckDir: unifiedWMWqPCR.Rcheck

Warnings: 1

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### Running command:
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###   C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:unifiedWMWqPCR.install-out.txt --library=C:\Users\biocbuild\bbs-3.10-bioc\R\library --no-vignettes --timings unifiedWMWqPCR_1.22.0.tar.gz
###
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* using log directory 'C:/Users/biocbuild/bbs-3.10-bioc/meat/unifiedWMWqPCR.Rcheck'
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'unifiedWMWqPCR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'unifiedWMWqPCR' version '1.22.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'unifiedWMWqPCR' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... WARNING
Documented arguments not in \usage in documentation object 'getEstimate':
  '...'

Functions with \usage entries need to have the appropriate \alias
entries, and all their arguments documented.
The \usage entries must correspond to syntactically valid R code.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING
See
  'C:/Users/biocbuild/bbs-3.10-bioc/meat/unifiedWMWqPCR.Rcheck/00check.log'
for details.

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/unifiedWMWqPCR_1.22.0.tar.gz && rm -rf unifiedWMWqPCR.buildbin-libdir && mkdir unifiedWMWqPCR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=unifiedWMWqPCR.buildbin-libdir unifiedWMWqPCR_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL unifiedWMWqPCR_1.22.0.zip && rm unifiedWMWqPCR_1.22.0.tar.gz unifiedWMWqPCR_1.22.0.zip
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100  310k  100  310k    0     0  6826k      0 --:--:-- --:--:-- --:--:-- 7384k

install for i386

* installing *source* package 'unifiedWMWqPCR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'order' from package 'base' in package 'unifiedWMWqPCR'
** help
*** installing help indices
  converting help for package 'unifiedWMWqPCR'
    finding HTML links ... done
    NBdata                                  html  
    as.matrix.uwmwEstimate                  html  
    as.matrix.uwmwRes                       html  
    forestplot-methods                      html  
    getEstimate-methods                     html  
    plot                                    html  
    sort_uwmwRes                            html  
    uWMW-methods                            html  
    unifiedWMWqPCR-package                  html  
    uwmwEstimate-class                      html  
    uwmwRes-class                           html  
    uwmw_Accessors                          html  
    uwmw_Extract                            html  
    volcanopar                              html  
    volcanoplot-methods                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'unifiedWMWqPCR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'unifiedWMWqPCR' as unifiedWMWqPCR_1.22.0.zip
* DONE (unifiedWMWqPCR)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'unifiedWMWqPCR' successfully unpacked and MD5 sums checked