Nima Hejazi
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/methyvim |
| Branch: RELEASE_3_10 |
| Last Commit: 79beaa5 |
| Last Changed Date: 2019-11-01 01:45:54 -0400 (Fri, 01 Nov 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:29:12 -0400 (Wed, 15 Apr 2020).
| Package 1030/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| methyvim 1.8.0 Nima Hejazi
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: methyvim |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/methyvim_1.8.0.tar.gz && rm -rf methyvim.buildbin-libdir && mkdir methyvim.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methyvim.buildbin-libdir methyvim_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL methyvim_1.8.0.zip && rm methyvim_1.8.0.tar.gz methyvim_1.8.0.zip |
| StartedAt: 2020-04-14 20:33:53 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 20:34:48 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 54.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/methyvim_1.8.0.tar.gz && rm -rf methyvim.buildbin-libdir && mkdir methyvim.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methyvim.buildbin-libdir methyvim_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL methyvim_1.8.0.zip && rm methyvim_1.8.0.tar.gz methyvim_1.8.0.zip
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install for i386
* installing *source* package 'methyvim' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'methyvim'
finding HTML links ... done
cluster_sites html
fdr_msa html
force_positivity html
limma_screen html
methyheat html
methytmle-class html
methyvim html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpuWi9K9/R.INSTALL290c374b4725/methyvim/man/methyvim.Rd:19: file link 'GenomicRatioSet' in package 'minfi' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpuWi9K9/R.INSTALL290c374b4725/methyvim/man/methyvim.Rd:41: file link 'getBeta' in package 'minfi' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpuWi9K9/R.INSTALL290c374b4725/methyvim/man/methyvim.Rd:42: file link 'getM' in package 'minfi' does not exist and so has been treated as a topic
methyvim_tmle html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpuWi9K9/R.INSTALL290c374b4725/methyvim/man/methyvim_tmle.Rd:25: file link 'getBeta' in package 'minfi' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpuWi9K9/R.INSTALL290c374b4725/methyvim/man/methyvim_tmle.Rd:26: file link 'getM' in package 'minfi' does not exist and so has been treated as a topic
methyvolc html
plot.methytmle html
set_parallel html
wrap_in_try html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'methyvim' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'methyvim' as methyvim_1.8.0.zip
* DONE (methyvim)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'methyvim' successfully unpacked and MD5 sums checked