Michael Love
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/alpine |
| Branch: RELEASE_3_10 |
| Last Commit: a46f925 |
| Last Changed Date: 2019-10-29 13:10:02 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:27:09 -0400 (Wed, 15 Apr 2020).
| Package 45/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| alpine 1.12.0 Michael Love
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: alpine |
| Version: 1.12.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/alpine_1.12.0.tar.gz && rm -rf alpine.buildbin-libdir && mkdir alpine.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=alpine.buildbin-libdir alpine_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL alpine_1.12.0.zip && rm alpine_1.12.0.tar.gz alpine_1.12.0.zip |
| StartedAt: 2020-04-14 19:53:45 -0400 (Tue, 14 Apr 2020) |
| EndedAt: 2020-04-14 19:54:38 -0400 (Tue, 14 Apr 2020) |
| EllapsedTime: 52.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/alpine_1.12.0.tar.gz && rm -rf alpine.buildbin-libdir && mkdir alpine.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=alpine.buildbin-libdir alpine_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL alpine_1.12.0.zip && rm alpine_1.12.0.tar.gz alpine_1.12.0.zip
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install for i386
* installing *source* package 'alpine' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'alpine'
finding HTML links ... done
alpine-package html
buildFragtypes html
estimateAbundance html
extractAlpine html
fitBiasModels html
getFragmentWidths html
getReadLength html
mergeGenes html
normalizeDESeq html
plotFragLen html
plotGC html
plotGRL html
plotOrder0 html
plotRelPos html
predictCoverage html
preprocessedData html
splitGenesAcrossChroms html
splitLongGenes html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'alpine' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'alpine' as alpine_1.12.0.zip
* DONE (alpine)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'alpine' successfully unpacked and MD5 sums checked