Vlad Petyuk
| Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020) |
| URL: https://git.bioconductor.org/packages/MSnID |
| Branch: RELEASE_3_10 |
| Last Commit: ad1f290 |
| Last Changed Date: 2019-10-29 13:09:04 -0400 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.10 |
|
This page was generated on 2020-04-15 12:23:41 -0400 (Wed, 15 Apr 2020).
| Package 1102/1823 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| MSnID 1.20.0 Vlad Petyuk
| malbec1 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | [ OK ] | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: MSnID |
| Version: 1.20.0 |
| Command: rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.20.0.tar.gz |
| StartedAt: 2020-04-15 09:13:42 -0400 (Wed, 15 Apr 2020) |
| EndedAt: 2020-04-15 09:14:20 -0400 (Wed, 15 Apr 2020) |
| EllapsedTime: 38.3 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: MSnID_1.20.0.zip |
| PackageFileSize: 3.556 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf MSnID.buildbin-libdir && mkdir MSnID.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MSnID.buildbin-libdir MSnID_1.20.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'MSnID' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MSnID'
finding HTML links ... done
MSnID-class html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/MSnID-class.Rd:65: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/MSnID-class.Rd:81: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/MSnID-class.Rd:102: file link 'proteins' in package 'MSnID' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/MSnID-class.Rd:188: file link 'MSnSet' in package 'MSnbase' does not exist and so has been treated as a topic
MSnID-package html
MSnIDFilter-class html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/MSnIDFilter-class.Rd:86: file link 'MSnSet' in package 'MSnbase' does not exist and so has been treated as a topic
accessions html
apply_filter html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/apply_filter.Rd:20: file link 'MSnIDFilter' in package 'MSnID' does not exist and so has been treated as a topic
assess_missed_cleavages html
assess_termini html
correct_peak_selection html
data html
evaluate_filter html
id_quality html
infer_parsimonious_accessions html
mass_measurement_error html
optimize_filter html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/optimize_filter.Rd:48: file link 'mclapply' in package 'parallel' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/optimize_filter.Rd:67: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
peptides html
psms html
read_mzIDs html
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/read_mzIDs.Rd:11: file link 'R.cache' in package 'R.cache' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.10-bioc/tmpdir/RtmpYLLhBX/R.INSTALL241465833b9c/MSnID/man/read_mzIDs.Rd:27: missing file link 'mzR-package'
recalibrate html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'MSnID' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MSnID' as MSnID_1.20.0.zip
* DONE (MSnID)