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INSTALL report for TSRchitect on tokay1

This page was generated on 2020-04-15 12:28:26 -0400 (Wed, 15 Apr 2020).

Package 1764/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TSRchitect 1.12.4
R. Taylor Raborn
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/TSRchitect
Branch: RELEASE_3_10
Last Commit: 309d642
Last Changed Date: 2019-12-16 14:09:01 -0400 (Mon, 16 Dec 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: TSRchitect
Version: 1.12.4
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/TSRchitect_1.12.4.tar.gz && rm -rf TSRchitect.buildbin-libdir && mkdir TSRchitect.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TSRchitect.buildbin-libdir TSRchitect_1.12.4.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL TSRchitect_1.12.4.zip && rm TSRchitect_1.12.4.tar.gz TSRchitect_1.12.4.zip
StartedAt: 2020-04-14 19:53:20 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:54:40 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 80.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/TSRchitect_1.12.4.tar.gz && rm -rf TSRchitect.buildbin-libdir && mkdir TSRchitect.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TSRchitect.buildbin-libdir TSRchitect_1.12.4.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL TSRchitect_1.12.4.zip && rm TSRchitect_1.12.4.tar.gz TSRchitect_1.12.4.zip
###
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install for i386

* installing *source* package 'TSRchitect' ...
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TSRchitect'
    finding HTML links ... done
    TSRchitectUsersGuide                    html  
    TSRmshapeIndex                          html  
    TSRshapeIndex                           html  
    addAnnotationToTSR-methods              html  
    finding level-2 HTML links ... done

    addTagCountsToTSR-methods               html  
    bedToTSS-methods                        html  
    createSummarizedExperiment-methods      html  
    detTSR-methods                          html  
    determineTSR-methods                    html  
    getBamDataFirstRead-methods             html  
    getBamDataLastRead-methods              html  
    getFileNames-methods                    html  
    getTSRdata-methods                      html  
    getTSScountData-methods                 html  
    getTSStagData-methods                   html  
    getTitle-methods                        html  
    gsq2bed-methods                         html  
    importAnnotationExternal-methods        html  
    importAnnotationHub-methods             html  
    inputToTSS-methods                      html  
    loadTSSobj-methods                      html  
    makeGRangesFromTSR-methods              html  
    mergeSampleData-methods                 html  
    prcTSS                                  html  
    processTSS-methods                      html  
    tagCountTSS                             html  
    tsrCluster                              html  
    tssArrayProperties                      html  
    tssObject                               html  
    writeTSR-methods                        html  
    writeTSS-methods                        html  
** building package indices
** installing vignettes
   'TSRchitect.Rmd' using 'UTF-8' 
   'TSRchitectUsersGuide.Rmd' using 'UTF-8' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TSRchitect' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'TSRchitect' as TSRchitect_1.12.4.zip
* DONE (TSRchitect)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'TSRchitect' successfully unpacked and MD5 sums checked