annotationTools 1.12.0
Alexandre Kuhn
| Bioconductor Changelog | | Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/annotationTools | | Last Changed Rev: 34811 / Revision: 38965 | | Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008) |
| wilson2 | Linux (openSUSE 11.1) / x86_64 | OK | OK | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | OK | [ OK ] | OK |
| pitt | Mac OS X Tiger (10.4.11) / i386 | OK | OK | OK |
| pelham | Mac OS X Leopard (10.5.6) / i386 | OK | OK | OK |
* checking for working pdflatex ... OK
* using log directory 'E:/biocbld/bbs-2.3-bioc/meat/annotationTools.Rcheck'
* using R version 2.8.1 (2008-12-22)
* using session charset: ISO8859-1
* checking for file 'annotationTools/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'annotationTools' version '1.12.0'
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'annotationTools' can be installed ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking data for non-ASCII characters ... OK
* creating annotationTools-Ex.R ... OK
* checking examples ... OK
* checking package vignettes in 'inst/doc' ... OK
* creating annotationTools-manual.tex ... OK
* checking annotationTools-manual.tex using pdflatex ... OK
installing R.css in E:/biocbld/bbs-2.3-bioc/meat/annotationTools.Rcheck
---------- Making package annotationTools ------------
adding build stamp to DESCRIPTION
installing R files
installing inst files
installing data files
preparing package annotationTools for lazy loading
Loading required package: Biobase
Loading required package: tools
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
installing man source files
installing indices
not zipping data
installing help
>>> Building/Updating help pages for package 'annotationTools'
Formats: text html latex example chm
HG-U133_Plus_2_annot_part text html latex chm
HG-U133_Plus_2_ortholog_part text html latex chm
Mouse430_2_annot_part text html latex chm
annot_HGU133A text html latex chm
Note: removing empty section \references in file 'compactList.Rd'
Note: removing empty section \references in file 'compactList.Rd'
compactList text html latex example chm
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getANNOTATION text html latex example chm
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getGENEID text html latex example chm
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getGENEONTOLOGY text html latex example chm
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getGENESYMBOL text html latex example chm
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getGENETITLE text html latex example chm
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getMULTIANNOTATION text html latex example chm
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Microsoft HTML Help Compiler 4.74.8702
Compiling e:\biocbld\bbs-2.3-bioc\meat\annotationTools.Rcheck\00_pkg_src\annotationTools\chm\annotationTools.chm
Compile time: 0 minutes, 0 seconds
21 Topics
47 Local links
8 Internet links
1 Graphic
Created e:\biocbld\bbs-2.3-bioc\meat\annotationTools.Rcheck\00_pkg_src\annotationTools\chm\annotationTools.chm, 39,012 bytes
Compression decreased file by 37,651 bytes.
adding MD5 sums
* DONE (annotationTools)