Package: m6Aboost
Type: Package
Title: m6Aboost
Version: 1.16.0
Date: 2025-06-27
Authors@R: c(person(given = "You",
                    family = "Zhou",
                    role = c("aut", "cre"),
                    email = "youzhoulearning@gmail.com",
                    comment = c(ORCID = "0000-0003-1755-9073")),
             person(given = "Kathi",
                    family = "Zarnack",
                    role = c("aut"),
                    email = "kathi.zarnack@bmls.de",
                    comment = c(ORCID = "0000-0003-3527-3378")))
Description: This package can help user to run the m6Aboost model on
        their own miCLIP2 data. The package includes functions to
        assign the read counts and get the features to run the m6Aboost
        model. The miCLIP2 data should be stored in a GRanges object.
        More details can be found in the vignette.
License: Artistic-2.0
VignetteBuilder: knitr
URL: https://github.com/ZarnackGroup/m6Aboost
BugReports: https://github.com/ZarnackGroup/m6Aboost/issues
biocViews: Sequencing, Epigenetics, Genetics, ExperimentHubSoftware
Encoding: UTF-8
RoxygenNote: 7.1.1
Imports: dplyr, rtracklayer, BSgenome, Biostrings, utils, methods,
        IRanges, ExperimentHub
Depends: S4Vectors, adabag, GenomicRanges, R (>= 4.1)
Suggests: knitr, rmarkdown, bookdown, testthat, BiocStyle,
        BSgenome.Mmusculus.UCSC.mm10
Config/pak/sysreqs: libfreetype6-dev libglu1-mesa-dev make texlive
        libbz2-dev libicu-dev liblzma-dev libpng-dev libxml2-dev
        libgl1-mesa-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:10:16 UTC
RemoteUrl: https://github.com/bioc/m6Aboost
RemoteRef: RELEASE_3_22
RemoteSha: 97ed1dd0009550a46e8a7fab70e3cb8ad8b1dfce
NeedsCompilation: no
Packaged: 2026-01-28 07:11:51 UTC; root
Author: You Zhou [aut, cre] (ORCID: <https://orcid.org/0000-0003-1755-9073>),
  Kathi Zarnack [aut] (ORCID: <https://orcid.org/0000-0003-3527-3378>)
Maintainer: You Zhou <youzhoulearning@gmail.com>
Built: R 4.5.2; ; 2026-01-28 07:14:46 UTC; windows
