Package: kmcut
Type: Package
Title: Optimized Kaplan Meier analysis and identification and
        validation of prognostic biomarkers
Version: 1.4.0
Authors@R: c(person(given = "Igor", family =  "Kuznetsov", role = c("aut", "cre"), email = "ibkalb@gmail.com"), person(given = "Javed", family = "Khan", role = "aut", email = "khanjav@mail.nih.gov")) 
Description: The purpose of the package is to identify prognostic
        biomarkers and an optimal numeric cutoff for each biomarker
        that can be used to stratify a group of test subjects (samples)
        into two sub-groups with significantly different survival
        (better vs. worse). The package was developed for the analysis
        of gene expression data, such as RNA-seq. However, it can be
        used with any quantitative variable that has a sufficiently
        large proportion of unique values.
License: Artistic-2.0
Encoding: UTF-8
Imports: survival, tools, methods, pracma, doParallel, foreach,
        parallel, SummarizedExperiment, S4Vectors
RoxygenNote: 7.2.3
Suggests: BiocStyle, knitr, rmarkdown,
VignetteBuilder: knitr
biocViews: Software, StatisticalMethod, GeneExpression, Survival
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 15:31:26 UTC
RemoteUrl: https://github.com/bioc/kmcut
RemoteRef: RELEASE_3_22
RemoteSha: 1fb44d15f893b52aa742aa76a2d58513d3347f29
NeedsCompilation: no
Packaged: 2026-01-29 08:18:22 UTC; root
Author: Igor Kuznetsov [aut, cre],
  Javed Khan [aut]
Maintainer: Igor Kuznetsov <ibkalb@gmail.com>
Built: R 4.5.2; ; 2026-01-29 08:19:49 UTC; windows
