| chargeCalculationGlobal | Protein Charge Calculation, Globally |
| chargeCalculationLocal | Charge Calculation Along a Protein Sequence |
| chargeHydropathyPlot | Charge-Hydropathy Plot |
| Disorder40 | Disorder-based Substitution Matrices. |
| Disorder60 | Disorder-based Substitution Matrices. |
| Disorder85 | Disorder-based Substitution Matrices. |
| DisorderMat | Disorder-based Substitution Matrices. |
| DUNMat | A Substitution Matrix for Aligning Intrinsically Disordered Proteins |
| EDSSMat | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat50 | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat60 | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat62 | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat70 | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat75 | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat80 | EDSSMat Disorder-based Substitution Matrices. |
| EDSSMat90 | EDSSMat Disorder-based Substitution Matrices. |
| foldIndexR | Prediction of Intrinsic Disorder with FoldIndex method in R |
| GorillaTP53 | Human Cellular tumor antigen p53 and homologs |
| hendersonHasselbalch | Henderson-Hasselbalch Equation |
| idpr | idpr: profiling and analyzing Intrinsically Disordered Proteins in R |
| idprofile | IDp PRofile From idpr Package |
| iupred | Prediction of Intrinsic Disorder with IUPred2A |
| iupredAnchor | Prediction of Intrinsic Disorder with IUPred2A |
| iupredRedox | Prediction of Intrinsic Disorder with IUPred2A |
| KDNorm | Kyte and Doolittle Scaled Hydropathy Index |
| meanScaledHydropathy | Calculate the Mean Scaled Hydropathy |
| netCharge | Protein Charge Calculation, Net Charge |
| pKaData | Sets of pKa values for Charged Amino Acids |
| scaledHydropathyGlobal | Protein Scaled Hydropathy Calculations |
| scaledHydropathyLocal | Calculate the Average Scaled Hydropathy of an Amino Acid Sequence |
| sequenceCheck | Sequence Check Function |
| sequenceMap | Sequence Map Function |
| sequenceMapCoordinates | Sequence Map Coordinates |
| sequencePlot | Sequence Plot |
| structuralTendency | Structural Tendency of Amino Acid Residues |
| structuralTendencyPlot | Plotting Structural Tendency of Amino Acid Sequence |
| TP53Sequences | Human Cellular tumor antigen p53 and homologs |