0f8996589d0460fbf6d58cd1a67c673d *CITATION
2cf275687cc04bc8d7d39dc40bb1cd8a *DESCRIPTION
b1799e3ef720894824ff7632bd15e38b *INDEX
f5487f0e90e411fc5c3be3a1f6d503a5 *LICENSE
77dca7b4360b84d8837b7779cc96f80e *Meta/Rd.rds
d4a03217c56fd16ffd5800d71c229d59 *Meta/data.rds
86d0636b4c700e416386835098fcba6f *Meta/features.rds
6939ada6fcde4dda17631a5a4f7a871a *Meta/hsearch.rds
73bc3a86cd35f04d640cfb7846c5e8a7 *Meta/links.rds
24f529a030afeb9fcf63a202433b93a9 *Meta/nsInfo.rds
5a074505fbfee3f61e3a1d4aabefb2a5 *Meta/package.rds
835633b9c43c6a28e739812365b465ad *Meta/vignette.rds
686c24924dffb12da8db49253a4ddc7c *NAMESPACE
0410a410bfc99b18b8fb90a429a0b4be *NEWS.Rd
d6c68f1fe41ced6e98a766a3757313da *R/crisprDesign
6f36bc0e9390dac097f92d5853965fcc *R/crisprDesign.rdb
289c0e831588911868c05826d2261cd1 *R/crisprDesign.rdx
1eddff6785d09c109bfbfab983ef4535 *TODO.txt
adc094a75a0a01a768a67eb43dec0c80 *data/Rdata.rdb
024829d7be2821c4dc446d7a1de14c25 *data/Rdata.rds
0bc9bc0ed6c5720515c3785641737e39 *data/Rdata.rdx
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6f19366937015eef9a43812545d6316e *doc/intro.R
4317c1ac45f13dd07ca2afebc89fddc3 *doc/intro.Rmd
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736f5421396f2bbef10ab18592cf9a64 *examples/combine.R
59c634c9a44639cfff39b1c5bee52825 *examples/example_be.R
5a6bc373093e36f7e88a4af8f25d834d *examples/example_cas12a.R
5591134fe0ec15c1fe69b0450e9b878f *examples/example_cas13d.R
a95927e59ab7f63f5a8880b765b54d3b *examples/example_cas9.R
5b135aac3fd6aba99a9bbd47fe48fd2e *examples/example_mouse.R
5d3b08596efa6163b5e5d739e4a8c1c9 *examples/example_multi_alleles.R
3f2d758bbd776f8e9a2c829d0f7102d9 *examples/example_multi_species.R
adeefdea101d4910651f77074f589c2a *examples/example_pamfree.R
a8a645875f16f1d1c39bcef3eee55724 *examples/examples.Rmd
6858667e94fdde442b6c212b973c5db5 *examples/ops.R
730d5703550204a6cb60602cfcb757e4 *extdata/common_snps_dbsnp151_example.vcf.gz
29b831dcce43efa208537d2444c183fc *extdata/common_snps_dbsnp151_example.vcf.gz.tbi
12598328fcee8e39246d0f775d9a8cc9 *fasta/chr12.fa
6573b86c9b1aecfca4fe685877a3eba0 *help/AnIndex
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02239a5f846615bcf0c5db05898ca327 *help/crisprDesign.rdb
0e2a969fabbd5f68244353d070c365f7 *help/crisprDesign.rdx
6f3006a8fb1dcfde9522eeacfd16ea39 *help/paths.rds
ddb2b5d1ee4a5a107057b1bff4852211 *html/00Index.html
8b9362669af13540a86a3ac6cf22f99d *html/R.css
3ed5c97e7319a44c642c47cd67c056a4 *paired/papers/cas_FokI.pdf
a2cc86c22fdd332ad7bb15547ac4af70 *paired/papers/double_nicking_d10A.pdf
0eb39176b4db96d47716a4635efafd67 *scripts/generateFastaExample.R
f51308d2e0ab8c00a1ba07a84ab767de *scripts/generateGuideSet.R
7f283ad40f0293ca18e7ae9bade98aa1 *scripts/generateGuideSetFullAnnotation.R
c979c0aebc27779ec1c20bf8c9e02f44 *scripts/generateRepeatsData.R
17578e1dcefac7b3cab8dff4417ef744 *scripts/generateTssData.R
382abbd01c1453f2906ecdec6bb94e5b *scripts/generateTxDbData.R
03bf063f2b5111830299f80603259e05 *scripts/generateVcfExample.R
90792e61397982c980676720c3b6f287 *utils/array.R
95d8a8aa655f217db90c99b82964d86d *utils/beFigure.R
e0b699b0840ef06bcc69ff7b7ac3973d *utils/celltracker.R
d73e1b592fc9dab4e99315dd41493a18 *utils/differential.R
097450de31d3cdf73ec3a748fc549338 *utils/dualGuides_equalization.R
50bec9e4bf16c98583efb42cdd00d612 *utils/dualGuides_normalization.R
2ce641cc7966b0e3a7dcaf408e98b917 *utils/dualGuides_transformations.R
df91d04f6236835decddb55b05d1cdc8 *utils/dualGuides_vizualizations.R
5088d61906bb6d7afdd296f357115ffa *utils/getCrisprBlissScores.R
81c80f2ce3eb62de15278a9825e6a8af *utils/getGeminiScores.R
fbb752b93108a1873cffa6d6538c894d *utils/minimap2.R
66513ae948b56c0484082c18e45a496e *utils/normalization.R
198f3171eba9ae394222c43ea7bbe6f6 *utils/pca.R
205c9c5950068be50cebd33ba5eb0740 *utils/qc.R
54e7756b369bd3ce9b096051041135e1 *utils/tiling.R
c8092a786bf1a057a4d58387b6230892 *utils/transformations.R
f8e694bac1d6fb5bc4331f876cf6590b *utils/utils.R
3e88a3da7f5bb23ba6d33ce75ed8c0f1 *utils/viz.R
