Package: CAFE
Type: Package
Title: Chromosmal Aberrations Finder in Expression data
Version: 1.46.0
Date: 2014-03-16
Author: Sander Bollen
Maintainer: Sander Bollen <sander.h.bollen@gmail.com>
Depends: R (>= 2.10), biovizBase, GenomicRanges, IRanges, ggbio
Imports: affy, ggplot2, annotate, grid, gridExtra, tcltk, Biobase
Suggests: RUnit, BiocGenerics, BiocStyle
Description: Detection and visualizations of gross chromosomal
        aberrations using Affymetrix expression microarrays as input
License: GPL-3
ByteCompile: true
biocViews: GeneExpression, Microarray, OneChannel, GeneSetEnrichment
Collate: microProcess-improve.R selectSamples.R chromosomeStats.R
        rawPlot.R slidPlot.R discontPlot.R facetPlot.R
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc-release.r-universe.dev
Date/Publication: 2025-10-29 14:18:22 UTC
RemoteUrl: https://github.com/bioc/CAFE
RemoteRef: RELEASE_3_22
RemoteSha: d96872534787222a9c5cf4e09fc1c1f96da61ddd
NeedsCompilation: no
Packaged: 2026-01-24 21:21:53 UTC; root
Built: R 4.5.2; ; 2026-01-24 21:24:03 UTC; windows
