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Index of /bioconductor/packages/devel/bioc/src/contrib/

File Name  ↓ File Size  ↓ Date  ↓ 
Parent directory/--
Meta/-2025-06-12 14:51:05
SwathXtend_2.31.0.tar.gz346.5 MiB2025-04-16 16:15:39
easyRNASeq_2.45.0.tar.gz69.6 MiB2025-04-16 16:15:15
TCGAbiolinks_2.37.0.tar.gz63.8 MiB2025-04-17 16:15:10
SplicingGraphs_1.49.0.tar.gz46.1 MiB2025-04-16 16:15:36
BaalChIP_1.35.0.tar.gz45.2 MiB2025-04-16 16:15:10
ELMER_2.33.0.tar.gz43.6 MiB2025-04-17 16:15:09
BioTIP_1.23.0.tar.gz41.4 MiB2025-04-16 16:15:11
ldblock_1.39.0.tar.gz40.1 MiB2025-04-16 16:15:23
sangeranalyseR_1.19.0.tar.gz38.2 MiB2025-04-16 16:15:31
cghMCR_1.67.0.tar.gz36.1 MiB2025-04-16 16:15:12
gwascat_2.41.0.tar.gz34.0 MiB2025-04-30 16:15:29
BiocSklearn_1.31.0.tar.gz32.5 MiB2025-04-16 16:15:10
canceR_1.43.0.tar.gz31.5 MiB2025-04-16 16:15:12
spatialHeatmap_2.15.0.tar.gz31.5 MiB2025-04-16 16:15:35
RbowtieCuda_1.1.1.tar.gz28.7 MiB2025-06-13 14:55:06
gmapR_1.51.0.tar.gz28.6 MiB2025-04-16 16:15:18
BubbleTree_2.39.0.tar.gz27.9 MiB2025-04-16 16:15:11
FitHiC_1.35.0.tar.gz27.7 MiB2025-04-16 16:15:16
oligo_1.73.0.tar.gz27.1 MiB2025-04-16 16:15:28
banocc_1.33.0.tar.gz26.1 MiB2025-04-16 16:15:10
iSEE_2.21.1.tar.gz25.6 MiB2025-06-04 16:15:30
scRepertoire_2.5.2.tar.gz21.6 MiB2025-05-28 16:15:33
ChIPpeakAnno_3.43.0.tar.gz21.5 MiB2025-05-15 16:15:08
ggcyto_1.37.0.tar.gz21.4 MiB2025-04-16 16:15:18
cytomapper_1.21.0.tar.gz21.0 MiB2025-04-16 16:15:13
iClusterPlus_1.45.0.tar.gz20.7 MiB2025-04-16 16:15:20
vtpnet_0.49.0.tar.gz20.2 MiB2025-04-30 16:15:30
ENmix_1.45.0.tar.gz20.0 MiB2025-04-16 16:15:15
CoGAPS_3.29.0.tar.gz19.8 MiB2025-04-16 16:15:13
DEGreport_1.45.0.tar.gz19.6 MiB2025-04-16 16:15:14
mixOmics_6.33.0.tar.gz18.9 MiB2025-04-16 16:15:26
SIAMCAT_2.13.0.tar.gz18.9 MiB2025-04-16 16:15:33
debrowser_1.37.0.tar.gz18.2 MiB2025-04-16 16:15:14
DECIPHER_3.5.0.tar.gz17.9 MiB2025-04-16 16:15:14
slalom_1.31.0.tar.gz17.6 MiB2025-04-16 16:15:34
sesame_1.27.0.tar.gz16.2 MiB2025-04-16 16:15:33
MoleculeExperiment_1.9.0.tar.gz15.6 MiB2025-04-16 16:15:27
ivygapSE_1.31.0.tar.gz15.4 MiB2025-04-16 16:15:22
msgbsR_1.33.0.tar.gz15.3 MiB2025-04-16 16:15:27
MoonlightR_1.35.0.tar.gz14.8 MiB2025-04-17 16:15:09
EGAD_1.37.0.tar.gz14.6 MiB2025-04-16 16:15:15
ATACseqQC_1.33.1.tar.gz14.5 MiB2025-05-15 16:15:08
knowYourCG_1.5.0.tar.gz14.5 MiB2025-04-16 16:15:22
spiky_1.15.0.tar.gz14.3 MiB2025-04-16 16:15:35
oposSOM_2.27.0.tar.gz13.4 MiB2025-04-16 16:15:28
NanoMethViz_3.5.2.tar.gz13.3 MiB2025-05-05 16:15:29
GEOquery_2.77.0.tar.gz13.1 MiB2025-04-16 16:15:17
ontoProc_2.3.0.tar.gz13.0 MiB2025-04-16 16:15:28
Rsubread_2.23.2.tar.gz12.9 MiB2025-06-12 14:46:16
chevreulPlot_1.1.2.tar.gz12.9 MiB2025-06-06 16:15:30
arrayQuality_1.87.0.tar.gz12.8 MiB2025-04-16 16:15:09
RcisTarget_1.29.0.tar.gz12.8 MiB2025-04-16 16:15:30
scPipe_2.9.0.tar.gz12.6 MiB2025-04-21 16:15:08
CINdex_1.37.0.tar.gz12.5 MiB2025-04-16 16:15:12
M3Drop_1.35.0.tar.gz12.2 MiB2025-04-16 16:15:23
Biostrings_2.77.1.tar.gz12.2 MiB2025-05-14 16:15:04
clusterExperiment_2.29.0.tar.gz12.0 MiB2025-04-16 16:15:12
maftools_2.25.10.tar.gz11.9 MiB2025-05-01 16:15:30
lpsymphony_1.37.0.tar.gz11.9 MiB2025-04-16 16:15:23
CRISPRseek_1.49.0.tar.gz11.9 MiB2025-04-16 16:15:13
transomics2cytoscape_1.19.0.tar.gz11.8 MiB2025-04-16 16:15:40
geneXtendeR_1.35.0.tar.gz11.7 MiB2025-04-16 16:15:17
EnrichedHeatmap_1.39.0.tar.gz11.6 MiB2025-04-16 16:15:15
Rhdf5lib_1.31.0.tar.gz11.5 MiB2025-04-16 16:15:30
CATALYST_1.33.0.tar.gz11.3 MiB2025-04-16 16:15:12
msPurity_1.35.0.tar.gz11.3 MiB2025-04-16 16:15:27
GEOexplorer_1.15.0.tar.gz11.3 MiB2025-04-16 16:15:17
DTA_2.55.0.tar.gz11.2 MiB2025-04-16 16:15:14
Glimma_2.19.2.tar.gz11.1 MiB2025-06-12 14:46:16
PCAtools_2.21.0.tar.gz11.0 MiB2025-04-16 16:15:28
flowStats_4.21.0.tar.gz11.0 MiB2025-04-16 16:15:16
Coralysis_0.99.6.tar.gz10.9 MiB2025-05-08 16:15:29
pRoloc_1.49.0.tar.gz10.8 MiB2025-04-16 16:15:29
QuaternaryProd_1.43.0.tar.gz10.8 MiB2025-04-16 16:15:30
rWikiPathways_1.29.0.tar.gz10.4 MiB2025-04-16 16:15:31
trackViewer_1.45.0.tar.gz10.3 MiB2025-04-16 16:15:40
RTN_2.33.0.tar.gz10.3 MiB2025-04-16 16:15:31
progeny_1.31.0.tar.gz10.1 MiB2025-04-16 16:15:29
STRINGdb_2.21.0.tar.gz10.0 MiB2025-04-16 16:15:36
ACME_2.65.0.tar.gz9.9 MiB2025-04-16 16:15:09
esATAC_1.31.0.tar.gz9.9 MiB2025-04-16 16:15:15
amplican_1.31.0.tar.gz9.8 MiB2025-04-16 16:15:09
qusage_2.43.0.tar.gz9.6 MiB2025-04-16 16:15:30
EnhancedVolcano_1.27.0.tar.gz9.6 MiB2025-04-16 16:15:15
OCplus_1.83.0.tar.gz9.6 MiB2025-04-16 16:15:28
signifinder_1.11.0.tar.gz9.6 MiB2025-04-16 16:15:34
phantasus_1.29.0.tar.gz9.6 MiB2025-04-16 16:15:28
weitrix_1.21.0.tar.gz9.5 MiB2025-04-16 16:15:42
bioCancer_1.37.0.tar.gz9.5 MiB2025-04-16 16:15:10
MethPed_1.37.0.tar.gz9.3 MiB2025-04-16 16:15:25
cytoviewer_1.9.0.tar.gz9.3 MiB2025-04-16 16:15:13
PRONE_1.3.1.tar.gz9.2 MiB2025-05-27 16:15:29
Statial_1.11.0.tar.gz9.2 MiB2025-04-16 16:15:36
xcms_4.7.1.tar.gz9.1 MiB2025-05-27 16:15:30
monocle_2.37.0.tar.gz9.0 MiB2025-04-16 16:15:27
SPONGE_1.31.0.tar.gz8.9 MiB2025-04-16 16:15:36
IntramiRExploreR_1.31.0.tar.gz8.9 MiB2025-04-16 16:15:21
acde_1.39.0.tar.gz8.9 MiB2025-04-16 16:15:09
dandelionR_1.1.0.tar.gz8.9 MiB2025-04-16 16:15:13
pandaR_1.41.0.tar.gz8.7 MiB2025-04-16 16:15:28
igvR_1.29.0.tar.gz8.6 MiB2025-04-16 16:15:21
methylMnM_1.47.0.tar.gz8.5 MiB2025-04-16 16:15:25
scp_1.19.2.tar.gz8.5 MiB2025-06-03 16:15:30
VaSP_1.21.0.tar.gz8.5 MiB2025-04-16 16:15:42
TPP_3.37.0.tar.gz8.4 MiB2025-04-16 16:15:40
OncoSimulR_4.11.1.tar.gz8.4 MiB2025-06-11 16:15:19
heatmaps_1.33.0.tar.gz8.3 MiB2025-04-16 16:15:19
KnowSeq_1.23.0.tar.gz8.2 MiB2025-04-16 16:15:22
rexposome_1.31.0.tar.gz8.1 MiB2025-04-16 16:15:30
CytoML_2.21.0.tar.gz8.1 MiB2025-04-16 16:15:13
lumi_2.61.0.tar.gz8.0 MiB2025-04-16 16:15:23
affycomp_1.85.0.tar.gz8.0 MiB2025-04-16 16:15:09
HDF5Array_1.37.0.tar.gz8.0 MiB2025-04-16 16:15:19
ChAMP_2.39.0.tar.gz8.0 MiB2025-04-18 16:15:09
scDataviz_1.19.0.tar.gz7.9 MiB2025-04-16 16:15:32
vidger_1.29.0.tar.gz7.9 MiB2025-04-16 16:15:42
hipathia_3.9.0.tar.gz7.8 MiB2025-04-16 16:15:20
INSPEcT_1.39.0.tar.gz7.8 MiB2025-04-16 16:15:21
snpStats_1.59.2.tar.gz7.7 MiB2025-05-22 16:15:29
MSnbase_2.35.0.tar.gz7.7 MiB2025-04-16 16:15:27
CRImage_1.57.0.tar.gz7.7 MiB2025-04-16 16:15:13
RnBeads_2.27.1.tar.gz7.6 MiB2025-05-27 16:15:30
flowCut_1.19.0.tar.gz7.6 MiB2025-04-16 16:15:16
alevinQC_1.25.0.tar.gz7.5 MiB2025-04-16 16:15:09
iSEEtree_1.3.1.tar.gz7.5 MiB2025-05-08 16:15:29
mzR_2.43.0.tar.gz7.5 MiB2025-04-16 16:15:27
GeneRegionScan_1.65.0.tar.gz7.5 MiB2025-04-16 16:15:17
chevreulShiny_1.1.2.tar.gz7.5 MiB2025-06-06 16:15:30
flowCore_2.21.0.tar.gz7.5 MiB2025-04-16 16:15:16
SpaNorm_1.3.0.tar.gz7.5 MiB2025-04-16 16:15:34
PhosR_1.19.0.tar.gz7.4 MiB2025-04-16 16:15:29
SPIAT_1.11.0.tar.gz7.4 MiB2025-04-16 16:15:35
GeneNetworkBuilder_1.51.0.tar.gz7.4 MiB2025-04-16 16:15:16
methylumi_2.55.0.tar.gz7.3 MiB2025-04-16 16:15:25
cogena_1.43.0.tar.gz7.3 MiB2025-04-16 16:15:13
Rgraphviz_2.53.0.tar.gz7.3 MiB2025-04-16 16:15:30
Gviz_1.53.0.tar.gz7.3 MiB2025-04-16 16:15:19
recount_1.35.0.tar.gz7.3 MiB2025-04-16 16:15:30
CTexploreR_1.5.0.tar.gz7.3 MiB2025-04-16 16:15:13
ChIPseeker_1.45.0.tar.gz7.2 MiB2025-04-16 16:15:12
shinyMethyl_1.45.0.tar.gz7.2 MiB2025-04-16 16:15:33
rifi_1.13.0.tar.gz7.2 MiB2025-04-16 16:15:30
affyPLM_1.85.0.tar.gz7.2 MiB2025-04-16 16:15:09
geneplast_1.35.0.tar.gz7.1 MiB2025-04-16 16:15:16
miloR_2.5.1.tar.gz7.0 MiB2025-06-05 16:15:30
CTdata_1.9.0.tar.gz7.0 MiB2025-04-16 16:15:13
DESpace_2.1.0.tar.gz6.9 MiB2025-04-16 16:15:14
Rhisat2_1.25.0.tar.gz6.8 MiB2025-04-16 16:15:30
SNPhood_1.39.0.tar.gz6.7 MiB2025-04-16 16:15:34
splatter_1.33.0.tar.gz6.7 MiB2025-04-16 16:15:35
flowcatchR_1.43.0.tar.gz6.7 MiB2025-04-16 16:15:16
chopsticks_1.75.0.tar.gz6.6 MiB2025-04-16 16:15:12
DeconRNASeq_1.51.0.tar.gz6.6 MiB2025-04-16 16:15:14
iSEEhub_1.11.0.tar.gz6.6 MiB2025-04-17 16:15:09
affycoretools_1.81.0.tar.gz6.6 MiB2025-04-16 16:15:09
systemPipeR_2.15.2.tar.gz6.5 MiB2025-05-28 16:15:33
DiffBind_3.19.0.tar.gz6.5 MiB2025-04-16 16:15:14
RCy3_2.29.1.tar.gz6.5 MiB2025-06-13 16:15:29
IsoformSwitchAnalyzeR_2.9.0.tar.gz6.5 MiB2025-04-16 16:15:22
synergyfinder_3.17.0.tar.gz6.5 MiB2025-04-16 16:15:39
RbcBook1_1.77.0.tar.gz6.4 MiB2025-04-16 16:15:30
MOSim_2.5.0.tar.gz6.4 MiB2025-04-16 16:15:27
pathMED_1.1.2.tar.gz6.3 MiB2025-05-28 16:15:32
DNAfusion_1.11.0.tar.gz6.3 MiB2025-05-09 16:15:29
GenomicSuperSignature_1.17.0.tar.gz6.3 MiB2025-04-16 16:15:17
GenomicDistributions_1.17.1.tar.gz6.3 MiB2025-04-25 16:15:17
muscat_1.23.0.tar.gz6.2 MiB2025-04-16 16:15:27
traseR_1.39.0.tar.gz6.2 MiB2025-04-16 16:15:40
metaSeq_1.49.0.tar.gz6.2 MiB2025-04-16 16:15:25
MCbiclust_1.33.0.tar.gz6.2 MiB2025-04-16 16:15:24
MetMashR_1.3.0.tar.gz6.2 MiB2025-05-30 16:15:29
psichomics_1.35.0.tar.gz6.1 MiB2025-04-16 16:15:29
NuPoP_2.17.0.tar.gz6.1 MiB2025-04-16 16:15:28
CatsCradle_1.3.0.tar.gz6.1 MiB2025-04-16 16:15:12
phyloseq_1.53.0.tar.gz6.1 MiB2025-04-16 16:15:29
imcRtools_1.15.0.tar.gz6.1 MiB2025-04-16 16:15:21
DeMixT_1.25.0.tar.gz6.1 MiB2025-04-16 16:15:14
genomation_1.41.0.tar.gz6.0 MiB2025-04-16 16:15:17
NADfinder_1.33.0.tar.gz6.0 MiB2025-05-15 16:15:08
monaLisa_1.15.0.tar.gz6.0 MiB2025-04-16 16:15:27
VariantTools_1.51.0.tar.gz6.0 MiB2025-04-16 16:15:41
TFutils_1.29.0.tar.gz6.0 MiB2025-04-16 16:15:40
DeconvoBuddies_1.1.0.tar.gz5.9 MiB2025-04-16 16:15:14
TreeAndLeaf_1.21.0.tar.gz5.9 MiB2025-04-16 16:15:40
MetaboDynamics_1.1.1.tar.gz5.9 MiB2025-05-20 16:15:29
GUIDEseq_1.39.0.tar.gz5.9 MiB2025-05-15 16:15:08
cytolib_2.21.0.tar.gz5.8 MiB2025-04-16 16:15:13
Pedixplorer_1.5.3.tar.gz5.8 MiB2025-05-06 16:15:29
microRNA_1.67.0.tar.gz5.7 MiB2025-04-16 16:15:25
PureCN_2.15.3.tar.gz5.7 MiB2025-04-28 16:15:29
MutationalPatterns_3.19.0.tar.gz5.7 MiB2025-04-17 16:15:09
projectR_1.25.0.tar.gz5.7 MiB2025-04-16 16:15:29
CCAFE_1.1.0.tar.gz5.7 MiB2025-04-16 16:15:12
BgeeCall_1.25.0.tar.gz5.7 MiB2025-04-16 16:15:10
ggspavis_1.15.7.tar.gz5.7 MiB2025-05-22 16:15:29
marray_1.87.0.tar.gz5.6 MiB2025-04-16 16:15:24
BSgenome_1.77.0.tar.gz5.6 MiB2025-04-16 16:15:11
ropls_1.41.0.tar.gz5.6 MiB2025-04-16 16:15:30
QFeatures_1.19.2.tar.gz5.5 MiB2025-05-27 16:15:29
CEMiTool_1.33.0.tar.gz5.5 MiB2025-04-17 16:15:09
DOSE_4.3.0.tar.gz5.5 MiB2025-04-16 16:15:14
hdxmsqc_1.5.0.tar.gz5.5 MiB2025-04-16 16:15:19
RUCova_1.1.0.tar.gz5.4 MiB2025-04-16 16:15:31
sights_1.35.0.tar.gz5.4 MiB2025-04-16 16:15:34
sosta_1.1.0.tar.gz5.4 MiB2025-04-16 16:15:34
seqPattern_1.41.0.tar.gz5.4 MiB2025-04-16 16:15:33
limmaGUI_1.85.0.tar.gz5.4 MiB2025-04-16 16:15:23
GDCRNATools_1.29.0.tar.gz5.3 MiB2025-04-16 16:15:16
epivizrChart_1.31.0.tar.gz5.3 MiB2025-04-16 16:15:15
CytoMDS_1.5.0.tar.gz5.3 MiB2025-04-16 16:15:13
TFEA.ChIP_1.29.0.tar.gz5.3 MiB2025-04-16 16:15:39
simPIC_1.5.3.tar.gz5.2 MiB2025-04-29 16:15:28
signatureSearch_1.23.0.tar.gz5.2 MiB2025-04-16 16:15:34
Ularcirc_1.27.0.tar.gz5.2 MiB2025-04-16 16:15:41
EBImage_4.51.0.tar.gz5.2 MiB2025-04-16 16:15:15
MethReg_1.19.0.tar.gz5.2 MiB2025-04-16 16:15:25
GOfuncR_1.29.0.tar.gz5.2 MiB2025-04-16 16:15:19
Cardinal_3.11.0.tar.gz5.2 MiB2025-04-16 16:15:12
tradeSeq_1.23.0.tar.gz5.2 MiB2025-04-16 16:15:40
VplotR_1.19.0.tar.gz5.2 MiB2025-04-16 16:15:42
SpatialExperiment_1.19.1.tar.gz5.2 MiB2025-05-09 16:15:29
cTRAP_1.27.0.tar.gz5.2 MiB2025-04-16 16:15:13
HiCBricks_1.27.0.tar.gz5.1 MiB2025-04-16 16:15:20
flowFP_1.67.0.tar.gz5.1 MiB2025-04-16 16:15:16
MACSr_1.17.0.tar.gz5.1 MiB2025-04-16 16:15:23
RFLOMICS_1.1.0.tar.gz5.1 MiB2025-04-16 16:15:30
flowWorkspace_4.21.0.tar.gz5.1 MiB2025-04-16 16:15:16
R3CPET_1.41.0.tar.gz5.1 MiB2025-04-16 16:15:30
ShortRead_1.67.0.tar.gz5.1 MiB2025-04-16 16:15:33
OMICsPCA_1.27.0.tar.gz5.0 MiB2025-04-16 16:15:28
scMultiSim_1.5.0.tar.gz5.0 MiB2025-04-16 16:15:32
decoupleR_2.15.0.tar.gz5.0 MiB2025-04-16 16:15:14
Banksy_1.5.4.tar.gz5.0 MiB2025-06-09 16:15:30
MEAT_1.21.0.tar.gz5.0 MiB2025-04-16 16:15:24
STATegRa_1.45.0.tar.gz4.9 MiB2025-04-16 16:15:36
Rhtslib_3.5.0.tar.gz4.9 MiB2025-04-16 16:15:30
EnMCB_1.21.0.tar.gz4.9 MiB2025-04-16 16:15:15
genefu_2.41.0.tar.gz4.9 MiB2025-04-16 16:15:16
FlowSOM_2.17.0.tar.gz4.9 MiB2025-04-16 16:15:16
Scale4C_1.31.0.tar.gz4.9 MiB2025-04-16 16:15:31
pmp_1.21.0.tar.gz4.9 MiB2025-04-16 16:15:29
CaMutQC_1.5.0.tar.gz4.8 MiB2025-05-01 16:15:30
Moonlight2R_1.7.0.tar.gz4.8 MiB2025-04-16 16:15:27
recountmethylation_1.19.0.tar.gz4.8 MiB2025-04-16 16:15:30
SpliceWiz_1.11.0.tar.gz4.8 MiB2025-04-16 16:15:35
fobitools_1.17.0.tar.gz4.8 MiB2025-04-16 16:15:16
branchpointer_1.35.0.tar.gz4.8 MiB2025-04-16 16:15:11
BioNERO_1.17.0.tar.gz4.8 MiB2025-04-16 16:15:10
mapscape_1.33.0.tar.gz4.8 MiB2025-04-16 16:15:24
MicrobiotaProcess_1.21.0.tar.gz4.8 MiB2025-04-16 16:15:25
Sconify_1.29.0.tar.gz4.8 MiB2025-04-16 16:15:32
GWENA_1.19.0.tar.gz4.8 MiB2025-04-16 16:15:19
ASpli_2.19.0.tar.gz4.8 MiB2025-04-16 16:15:09
nullranges_1.15.0.tar.gz4.8 MiB2025-04-16 16:15:28
biscuiteer_1.23.0.tar.gz4.8 MiB2025-05-14 16:15:04
chevreulProcess_1.1.2.tar.gz4.8 MiB2025-06-06 16:15:30
mnem_1.25.0.tar.gz4.8 MiB2025-04-16 16:15:26
doubletrouble_1.9.0.tar.gz4.8 MiB2025-04-16 16:15:14
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biocthis_1.19.0.tar.gz662.2 KiB2025-04-16 16:15:10
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loci2path_1.29.0.tar.gz610.0 KiB2025-04-16 16:15:23
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dks_1.55.0.tar.gz601.7 KiB2025-04-16 16:15:14
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cliqueMS_1.23.0.tar.gz557.4 KiB2025-04-16 16:15:12
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VDJdive_1.11.0.tar.gz551.1 KiB2025-04-16 16:15:42
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OPWeight_1.31.0.tar.gz548.7 KiB2025-04-17 16:15:09
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ssize_1.83.0.tar.gz545.8 KiB2025-04-16 16:15:36
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viper_1.43.0.tar.gz505.1 KiB2025-04-16 16:15:42
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RUVSeq_1.43.0.tar.gz501.2 KiB2025-04-16 16:15:31
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Rmagpie_1.65.0.tar.gz483.1 KiB2025-04-16 16:15:30
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les_1.59.0.tar.gz449.2 KiB2025-04-16 16:15:23
MEDME_1.69.0.tar.gz448.6 KiB2025-04-16 16:15:24
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ccmap_1.35.0.tar.gz444.9 KiB2025-04-16 16:15:12
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