Package: quantro
Title: A test for when to use quantile normalization
Version: 1.45.0
Authors@R: c(
    person("Stephanie", "Hicks", role = c("aut", "cre"), 
            email = "shicks19@jhu.edu", 
            comment = c(ORCID = "0000-0002-7858-0231")),
    person("Rafael", "Irizarry", role = "aut", 
            comment = c(ORCID = "0000-0002-3944-4309")))
Imports: Biobase, minfi, doParallel, foreach, iterators, ggplot2,
        methods, RColorBrewer
Depends: R (>= 4.0)
Suggests: rmarkdown, knitr, RUnit, BiocGenerics, BiocStyle
VignetteBuilder: knitr
RoxygenNote: 6.0.1
Encoding: UTF-8
Description: A data-driven test for the assumptions of quantile
        normalization using raw data such as objects that inherit eSets
        (e.g. ExpressionSet, MethylSet). Group level information about
        each sample (such as Tumor / Normal status) must also be
        provided because the test assesses if there are global
        differences in the distributions between the user-defined
        groups.
License: GPL-3
biocViews: Normalization, Preprocessing, MultipleComparison,
        Microarray, Sequencing
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev libx11-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 14:20:56 UTC
RemoteUrl: https://github.com/bioc/quantro
RemoteRef: HEAD
RemoteSha: 8733992f85578dac4d31b2460ba667c82144018e
NeedsCompilation: no
Packaged: 2026-02-08 09:43:23 UTC; root
Author: Stephanie Hicks [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-7858-0231>),
  Rafael Irizarry [aut] (ORCID: <https://orcid.org/0000-0002-3944-4309>)
Maintainer: Stephanie Hicks <shicks19@jhu.edu>
Built: R 4.6.0; ; 2026-02-08 09:45:41 UTC; windows
