| adata |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| adata-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| add_alpha |
Color Palettes |
| add_facets |
A Simple Grammar of Base Graphics |
| add_mark |
A Simple Grammar of Base Graphics |
| aindex |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| aindex-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| aindex-method |
Sparse Vectors and Matrices |
| all-method |
Summary Statistics for "matter" Objects |
| any-method |
Summary Statistics for "matter" Objects |
| approx1 |
Resampling in 1D with Interpolation |
| approx2 |
Resampling in 2D with Interpolation |
| Arith |
Deferred Operations on "matter" Objects |
| Arith-method |
Deferred Operations on "matter" Objects |
| as.array-method |
Out-of-Core Arrays |
| as.array-method |
Sparse Vectors and Matrices |
| as.character-method |
Out-of-Core Strings |
| as.data.frame-method |
Delta Run Length Encoding |
| as.data.frame-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| as.data.frame-method |
Streaming Summary Statistics |
| as.factor-method |
Delta Run Length Encoding |
| as.factor-method |
Out-of-Core Factors |
| as.integer-method |
Delta Run Length Encoding |
| as.integer-method |
Out-of-Core Arrays |
| as.integer-method |
Sparse Vectors and Matrices |
| as.list-method |
Chunked Vectors, Arrays, and Lists |
| as.list-method |
Delta Run Length Encoding |
| as.list-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| as.list-method |
Out-of-Core Lists of Vectors |
| as.logical-method |
Out-of-Core Arrays |
| as.logical-method |
Sparse Vectors and Matrices |
| as.matrix-method |
Out-of-Core Arrays |
| as.matrix-method |
Sparse Vectors and Matrices |
| as.matter |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| as.numeric-method |
Delta Run Length Encoding |
| as.numeric-method |
Out-of-Core Arrays |
| as.numeric-method |
Sparse Vectors and Matrices |
| as.raw-method |
Out-of-Core Arrays |
| as.raw-method |
Sparse Vectors and Matrices |
| as.shared |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| as.sparse |
Sparse Vectors and Matrices |
| as.vector |
Out-of-Core Arrays |
| as.vector-method |
Delta Run Length Encoding |
| as.vector-method |
Out-of-Core Arrays |
| as.vector-method |
Out-of-Core Factors |
| as.vector-method |
Out-of-Core Lists of Vectors |
| as.vector-method |
Out-of-Core Strings |
| as.vector-method |
Sparse Vectors and Matrices |
| asearch |
Deprecated and defunct objects in matter |
| as_facets |
A Simple Grammar of Base Graphics |
| as_layers |
A Simple Grammar of Base Graphics |
| atomdata |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomdata-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomdata-method |
Sparse Vectors and Matrices |
| atomdata<- |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomdata<--method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomindex |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomindex-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomindex-method |
Sparse Vectors and Matrices |
| atomindex<- |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atomindex<--method |
Sparse Vectors and Matrices |
| atoms |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| atoms-class |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| avg |
Central Tendency |
| c-method |
Delta Run Length Encoding |
| c-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| c-method |
Out-of-Core Arrays |
| c-method |
Out-of-Core Lists of Vectors |
| c-method |
Out-of-Core Strings |
| c-method |
A Simple Grammar of Base Graphics |
| cbind2-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| cbind2-method |
Out-of-Core Arrays |
| cbind2-method |
Sparse Vectors and Matrices |
| checksum |
Calculate Checksums and Cryptographic Hashes |
| checksum-method |
Calculate Checksums and Cryptographic Hashes |
| chunkApply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunked |
Chunked Vectors, Arrays, and Lists |
| chunked-class |
Chunked Vectors, Arrays, and Lists |
| chunked_arr |
Chunked Vectors, Arrays, and Lists |
| chunked_arr-class |
Chunked Vectors, Arrays, and Lists |
| chunked_list |
Chunked Vectors, Arrays, and Lists |
| chunked_list-class |
Chunked Vectors, Arrays, and Lists |
| chunked_mat |
Chunked Vectors, Arrays, and Lists |
| chunked_mat-class |
Chunked Vectors, Arrays, and Lists |
| chunked_vec |
Chunked Vectors, Arrays, and Lists |
| chunked_vec-class |
Chunked Vectors, Arrays, and Lists |
| chunkify |
Chunked Vectors, Arrays, and Lists |
| chunkLapply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunkMapply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunk_apply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunk_colapply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunk_lapply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunk_mapply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunk_rowapply |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| chunk_writer |
Apply Functions Over Chunks of a List, Vector, or Matrix |
| class:atoms |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| class:chunked |
Chunked Vectors, Arrays, and Lists |
| class:chunked_arr |
Chunked Vectors, Arrays, and Lists |
| class:chunked_list |
Chunked Vectors, Arrays, and Lists |
| class:chunked_mat |
Chunked Vectors, Arrays, and Lists |
| class:chunked_vec |
Chunked Vectors, Arrays, and Lists |
| class:drle |
Delta Run Length Encoding |
| class:drle_fct |
Delta Run Length Encoding |
| class:matter |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| class:matter_arr |
Out-of-Core Arrays |
| class:matter_fct |
Out-of-Core Factors |
| class:matter_list |
Out-of-Core Lists of Vectors |
| class:matter_mat |
Out-of-Core Arrays |
| class:matter_str |
Out-of-Core Strings |
| class:matter_vec |
Out-of-Core Arrays |
| class:simple_logger |
Simple Logging |
| class:SnowfastParam |
Fast Simple Network of Workstations (SNOW)-style Parallel Backend |
| class:sparse_arr |
Sparse Vectors and Matrices |
| class:sparse_mat |
Sparse Vectors and Matrices |
| class:sparse_vec |
Sparse Vectors and Matrices |
| coef.opls |
Partial Least Squares |
| coldist |
Compute Distances between Rows or Columns of a Matrix |
| colDists |
Compute Distances between Rows or Columns of a Matrix |
| colDists-method |
Compute Distances between Rows or Columns of a Matrix |
| coldist_at |
Compute Distances between Rows or Columns of a Matrix |
| colMeans |
Summary Statistics for "matter" Objects |
| colMeans-method |
Summary Statistics for "matter" Objects |
| colscale |
Scaling and Centering by Row or Column Based on Grouping |
| colscale-method |
Scaling and Centering by Row or Column Based on Grouping |
| colStats |
Row and Column Summary Statistics Based on Grouping |
| colStats-method |
Row and Column Summary Statistics Based on Grouping |
| colSums |
Summary Statistics for "matter" Objects |
| colSums-method |
Summary Statistics for "matter" Objects |
| colsweep |
Sweep out Matrix Summaries Based on Grouping |
| colsweep-method |
Sweep out Matrix Summaries Based on Grouping |
| combine-method |
Delta Run Length Encoding |
| combine-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| combine-method |
Out-of-Core Arrays |
| combine-method |
Out-of-Core Factors |
| combine-method |
Out-of-Core Lists of Vectors |
| combine-method |
Out-of-Core Strings |
| combine-method |
Streaming Summary Statistics |
| combine-method |
A Simple Grammar of Base Graphics |
| Compare |
Deferred Operations on "matter" Objects |
| convolve_at |
Convolution at Arbitrary Indices |
| coscore |
Colocalization Coefficients |
| cpal |
Color Palettes |
| cpals |
Color Palettes |
| crossprod-method |
Out-of-Core Arrays |
| crossprod-method |
Sparse Vectors and Matrices |
| cv_do |
Perform Cross Validation |
| cwt |
CWT-based Peak Detection |
| deprecated |
Deprecated and defunct objects in matter |
| describe_for_display-method |
Chunked Vectors, Arrays, and Lists |
| dim-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| dim-method |
Out-of-Core Arrays |
| dim-method |
Out-of-Core Lists of Vectors |
| dim-method |
Out-of-Core Strings |
| dim-method |
Sparse Vectors and Matrices |
| dim<--method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| dim<--method |
Out-of-Core Arrays |
| dimnames-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| dimnames<--method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| dims-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| domain |
Sparse Vectors and Matrices |
| domain-method |
Sparse Vectors and Matrices |
| domain<- |
Sparse Vectors and Matrices |
| domain<--method |
Sparse Vectors and Matrices |
| downsample |
Downsample a Signal |
| dpal |
Color Palettes |
| dpals |
Color Palettes |
| drle |
Delta Run Length Encoding |
| drle-class |
Delta Run Length Encoding |
| drle_fct |
Delta Run Length Encoding |
| drle_fct-class |
Delta Run Length Encoding |
| droplevels-method |
Delta Run Length Encoding |
| length-method |
Chunked Vectors, Arrays, and Lists |
| length-method |
Delta Run Length Encoding |
| length-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| length-method |
Out-of-Core Lists of Vectors |
| length-method |
Out-of-Core Strings |
| length-method |
Sparse Vectors and Matrices |
| length<--method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| lengths-method |
Chunked Vectors, Arrays, and Lists |
| lengths-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| lengths-method |
Out-of-Core Lists of Vectors |
| lengths-method |
Out-of-Core Strings |
| lengths-method |
Sparse Vectors and Matrices |
| levels-method |
Delta Run Length Encoding |
| levels-method |
Out-of-Core Factors |
| levels<--method |
Delta Run Length Encoding |
| levels<--method |
Out-of-Core Factors |
| locmax |
Peak Detection |
| locmin |
Peak Detection |
| log-method |
Out-of-Core Arrays |
| log-method |
Sparse Vectors and Matrices |
| log10-method |
Out-of-Core Arrays |
| log10-method |
Sparse Vectors and Matrices |
| log1p-method |
Out-of-Core Arrays |
| log1p-method |
Sparse Vectors and Matrices |
| log2-method |
Out-of-Core Arrays |
| log2-method |
Sparse Vectors and Matrices |
| Logic |
Deferred Operations on "matter" Objects |
| logLik.nscentroids |
Nearest Shrunken Centroids |
| logLik.sgmix |
Spatial Gaussian Mixture Model |
| path |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| path-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| path-method |
Simple Logging |
| path<- |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| path<--method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| path<--method |
Simple Logging |
| peakareas |
Peak Summarization |
| peakheights |
Peak Summarization |
| peakwidths |
Peak Summarization |
| pinv |
Pseudoinverse of a Matrix |
| plot-method |
A Simple Grammar of Base Graphics |
| plot-method |
Plotting Graphical Marks |
| plot.vizi_bars |
Plotting Graphical Marks |
| plot.vizi_boxplot |
Plotting Graphical Marks |
| plot.vizi_image |
Plotting Graphical Marks |
| plot.vizi_intervals |
Plotting Graphical Marks |
| plot.vizi_lines |
Plotting Graphical Marks |
| plot.vizi_peaks |
Plotting Graphical Marks |
| plot.vizi_pixels |
Plotting Graphical Marks |
| plot.vizi_points |
Plotting Graphical Marks |
| plot.vizi_rules |
Plotting Graphical Marks |
| plot.vizi_text |
Plotting Graphical Marks |
| plot.vizi_voxels |
Plotting Graphical Marks |
| plot_image |
Plot a Signal or Image |
| plot_signal |
Plot a Signal or Image |
| pls |
Partial Least Squares |
| pls_kernel |
Partial Least Squares |
| pls_nipals |
Partial Least Squares |
| pls_simpls |
Partial Least Squares |
| pointers |
Sparse Vectors and Matrices |
| pointers-method |
Sparse Vectors and Matrices |
| pointers<- |
Sparse Vectors and Matrices |
| pointers<--method |
Sparse Vectors and Matrices |
| prcomp |
Principal Components Analysis for "matter" Matrices |
| prcomp-method |
Principal Components Analysis for "matter" Matrices |
| prcomp_lanczos |
Principal Components Analysis for "matter" Matrices |
| predict.fastmap |
FastMap Projection |
| predict.nnmf |
Nonnegative Matrix Factorization |
| predict.nscentroids |
Nearest Shrunken Centroids |
| predict.opls |
Partial Least Squares |
| predict.pls |
Partial Least Squares |
| predscore |
Score predictive performance |
| preplot-method |
A Simple Grammar of Base Graphics |
| preview_for_display-method |
Chunked Vectors, Arrays, and Lists |
| print-method |
A Simple Grammar of Base Graphics |
| prod-method |
Summary Statistics for "matter" Objects |
| profmem |
Deprecated and defunct objects in matter |
| range-method |
Summary Statistics for "matter" Objects |
| raw2hex |
Universally Unique Identifiers |
| rbind2-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| rbind2-method |
Out-of-Core Arrays |
| rbind2-method |
Sparse Vectors and Matrices |
| readonly |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| readonly-method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| readonly<- |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| readonly<--method |
Vectors, Matrices, and Arrays Stored in Virtual Memory |
| reldiff |
Binary Search with Approximate Matching |
| rescale |
Signal Normalization |
| rescale_iqr |
Signal Normalization |
| rescale_range |
Signal Normalization |
| rescale_ref |
Signal Normalization |
| rescale_rms |
Signal Normalization |
| rescale_sum |
Signal Normalization |
| residuals.opls |
Partial Least Squares |
| ricker |
CWT-based Peak Detection |
| RNGStreams |
Parallel RNG Streams |
| rocscore |
Compute area under ROC curve |
| roll |
Rolling Summaries of a Vector |
| rollvec |
Rolling Summaries of a Vector |
| rowdist |
Compute Distances between Rows or Columns of a Matrix |
| rowDists |
Compute Distances between Rows or Columns of a Matrix |
| rowDists-method |
Compute Distances between Rows or Columns of a Matrix |
| rowdist_at |
Compute Distances between Rows or Columns of a Matrix |
| rowMaj |
Out-of-Core Arrays |
| rowMaj-method |
Out-of-Core Arrays |
| rowMaj-method |
Sparse Vectors and Matrices |
| rowMeans |
Summary Statistics for "matter" Objects |
| rowMeans-method |
Summary Statistics for "matter" Objects |
| rowscale |
Scaling and Centering by Row or Column Based on Grouping |
| rowscale-method |
Scaling and Centering by Row or Column Based on Grouping |
| rowStats |
Row and Column Summary Statistics Based on Grouping |
| rowStats-method |
Row and Column Summary Statistics Based on Grouping |
| rowSums |
Summary Statistics for "matter" Objects |
| rowSums-method |
Summary Statistics for "matter" Objects |
| rowsweep |
Sweep out Matrix Summaries Based on Grouping |
| rowsweep-method |
Sweep out Matrix Summaries Based on Grouping |