| createModel | Create the model with the optimal features |
| crm.features | This is data to be included in my package |
| evaluateModelPerformance | Evaluate model performances |
| feature.ranking | This is data to be included in my package |
| LedPred | Creates an SVM model given a feature matrix |
| mapFeaturesToCRMs | R interface to bed_to_matrix REST in server |
| mcTune | Tuning the SVM parameters |
| rankFeatures | Ranking the features according to their importance |
| scoreData | Predicting new regulatory regions |
| tuneFeatureNb | Selecting the optimal number of features |