wpm
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see wpm.
Well Plate Maker
Bioconductor version: 3.12
This is a shiny application for creating well-plate plans. It uses a backtracking-inspired algorithm to place samples on plates based on specific neighborhood constraints.
Author: Helene Borges [aut, cre], Thomas Burger [aut]
Maintainer: Helene Borges <borges.helene.sophie at gmail.com>
citation("wpm")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("wpm")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("wpm")| How to use Well Plate Maker | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | BatchEffect, ExperimentalDesign, GUI, MassSpectrometry, Proteomics, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.12 (R-4.0) (3.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 4.0.0) |
| Imports | utils, methods, cli, Biobase, SummarizedExperiment, config, golem, shiny, DT, ggplot2, dplyr, rlang, stringr, shinydashboard, shinyWidgets, shinycustomloader, RColorBrewer, logging |
| System Requirements | |
| URL |
See More
| Suggests | MSnbase, testthat, BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | wpm_1.0.0.tar.gz |
| Windows Binary | wpm_1.0.0.zip |
| macOS 10.13 (High Sierra) | wpm_1.0.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/wpm |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/wpm |
| Bioc Package Browser | https://code.bioconductor.org/browse/wpm/ |
| Package Short Url | https://bioconductor.org/packages/wpm/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |