Rdisop
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see Rdisop.
Decomposition of Isotopic Patterns
Bioconductor version: 3.12
Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.
Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>
Maintainer: Steffen Neumann <sneumann at ipb-halle.de>
citation("Rdisop")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Rdisop")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Rdisop")| Molecule Identification with Rdisop | |
| Reference Manual | |
| INSTALL | Text |
Details
| biocViews | ImmunoOncology, MassSpectrometry, Metabolomics, Software |
| Version | 1.50.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (16 years) |
| License | GPL-2 |
| Depends | R (>= 2.0.0), Rcpp |
| Imports | |
| System Requirements | None |
| URL | https://github.com/sneumann/Rdisop |
| Bug Reports | https://github.com/sneumann/Rdisop/issues/new |
See More
| Suggests | RUnit |
| Linking To | Rcpp |
| Enhances | |
| Depends On Me | |
| Imports Me | enviGCMS, HiResTEC, InterpretMSSpectrum, MetaDBparse |
| Suggests Me | adductomicsR, MSnbase, RforProteomics |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | Rdisop_1.50.0.tar.gz |
| Windows Binary | Rdisop_1.50.0.zip (32- & 64-bit) |
| macOS 10.13 (High Sierra) | Rdisop_1.50.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Rdisop |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Rdisop |
| Bioc Package Browser | https://code.bioconductor.org/browse/Rdisop/ |
| Package Short Url | https://bioconductor.org/packages/Rdisop/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |