NPARC
This package is for version 3.12 of Bioconductor; for the stable, up-to-date release version, see NPARC.
Non-parametric analysis of response curves for thermal proteome profiling experiments
Bioconductor version: 3.12
Perform non-parametric analysis of response curves as described by Childs, Bach, Franken et al. (2019): Non-parametric analysis of thermal proteome profiles reveals novel drug-binding proteins.
Author: Dorothee Childs, Nils Kurzawa
Maintainer: Nils Kurzawa <nils.kurzawa at embl.de>
citation("NPARC")):
Installation
To install this package, start R (version "4.0") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("NPARC")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("NPARC")| Analysing thermal proteome profiling data with the NPARC package | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Proteomics, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.11 (R-4.0) (4 years) |
| License | GPL-3 |
| Depends | R (>= 4.0.0) |
| Imports | dplyr, tidyr, BiocParallel, broom, MASS, rlang, magrittr, stats, methods |
| System Requirements | |
| URL |
See More
| Suggests | testthat, devtools, knitr, rprojroot, rmarkdown, ggplot2, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | NPARC_1.2.0.tar.gz |
| Windows Binary | NPARC_1.2.0.zip |
| macOS 10.13 (High Sierra) | NPARC_1.2.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/NPARC |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/NPARC |
| Bioc Package Browser | https://code.bioconductor.org/browse/NPARC/ |
| Package Short Url | https://bioconductor.org/packages/NPARC/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.12 | Source Archive |