############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 snifter ### ############################################################################## ############################################################################## * checking for file ‘snifter/DESCRIPTION’ ... OK * preparing ‘snifter’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘snifter.Rmd’ using rmarkdown Quitting from snifter.Rmd:74-81 [run] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `lock()`: ! Cannot open lock file: No such file or directory --- Backtrace: ▆ 1. └─snifter::fitsne(counts, random_state = 42L) 2. └─snifter:::.create_tsne(...) 3. └─basilisk::basiliskStart(python_env) 4. └─basilisk::obtainEnvironmentPath(env) 5. └─basilisk::lockExternalDir(exdir, exclusive = FALSE) 6. └─dir.expiry::lockDirectory(path, ...) 7. └─filelock::lock(plock, exclusive = FALSE) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'snifter.Rmd' failed with diagnostics: Cannot open lock file: No such file or directory --- failed re-building ‘snifter.Rmd’ SUMMARY: processing the following file failed: ‘snifter.Rmd’ Error: Vignette re-building failed. Execution halted