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### Running command:
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###   F:\biocbuild\bbs-3.22-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:sevenC.install-out.txt --library=F:\biocbuild\bbs-3.22-bioc\R\library --no-vignettes --timings sevenC_1.29.1.tar.gz
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* using log directory 'F:/biocbuild/bbs-3.22-bioc/meat/sevenC.Rcheck'
* using R version 4.5.1 (2025-06-13 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'sevenC/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'sevenC' version '1.29.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'sevenC' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... NOTE
Unexported object imported by a ':::' call: 'GenomicRanges:::get_out_of_bound_index'
  See the note in ?`:::` about the use of this operator.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  addInteractionSupport.Rd: GInteractions, InteractionSet
  addMotifScore.Rd: GInteractions
  addStrandCombination.Rd: GInteractions
  getCisPairs.Rd: GInteractions
  parseLoopsRao.Rd: GInteractions
  parseLoopsTang.Rd: GInteractions
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R'
 ERROR
Running the tests in 'tests/testthat.R' failed.
Last 13 lines of output:
    'test-parseChIP-seq.R:188:1', 'test-parseChIP-seq.R:207:1'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-parseChIP-seq.R:237:3'): addCovToGR works with wig file ────────
  Error in `h(simpleError(msg, call))`: error in evaluating the argument 'x' in selecting a method for function 'seqlevelsInUse': object 'selectWin' not found
  Backtrace:
      ▆
   1. ├─sevenC::addCovToGR(...) at test-parseChIP-seq.R:237:3
   2. │ └─Seqinfo::seqlevelsInUse(selectWin)
   3. └─base::.handleSimpleError(...)
   4.   └─base (local) h(simpleError(msg, call))
  
  [ FAIL 1 | WARN 0 | SKIP 9 | PASS 39 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 2 NOTEs
See
  'F:/biocbuild/bbs-3.22-bioc/meat/sevenC.Rcheck/00check.log'
for details.