############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data motifTestR ### ############################################################################## ############################################################################## * checking for file ‘motifTestR/DESCRIPTION’ ... OK * preparing ‘motifTestR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘motifAnalysis.Rmd’ using rmarkdown 2025-04-21 17:36:58.777 R[94252:724058916] XType: com.apple.fonts is not accessible. 2025-04-21 17:36:58.777 R[94252:724058916] XType: XTFontStaticRegistry is enabled. Quitting from motifAnalysis.Rmd:357-363 [compare-andr-foxa1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `view_motifs_prep()`: ! unused argument (flip.neg = flip.neg) --- Backtrace: ▆ 1. └─universalmotif::view_motifs(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'motifAnalysis.Rmd' failed with diagnostics: unused argument (flip.neg = flip.neg) --- failed re-building ‘motifAnalysis.Rmd’ SUMMARY: processing the following file failed: ‘motifAnalysis.Rmd’ Error: Vignette re-building failed. Execution halted