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###
### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data motifTestR
###
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* checking for file ‘motifTestR/DESCRIPTION’ ... OK
* preparing ‘motifTestR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘motifAnalysis.Rmd’ using rmarkdown
2025-04-21 17:02:48.038 R[89775:1000676376] XType: Using static font registry.

Quitting from motifAnalysis.Rmd:357-363 [compare-andr-foxa1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `view_motifs_prep()`:
! unused argument (flip.neg = flip.neg)
---
Backtrace:
    ▆
 1. └─universalmotif::view_motifs(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'motifAnalysis.Rmd' failed with diagnostics:
unused argument (flip.neg = flip.neg)
--- failed re-building ‘motifAnalysis.Rmd’

SUMMARY: processing the following file failed:
  ‘motifAnalysis.Rmd’

Error: Vignette re-building failed.
Execution halted