############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 miRspongeR ### ############################################################################## ############################################################################## * checking for file ‘miRspongeR/DESCRIPTION’ ... OK * preparing ‘miRspongeR’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘miRspongeR.Rmd’ using rmarkdown Quitting from miRspongeR.Rmd:183-194 [unnamed-chunk-8] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `.check_ncores()`: ! 70 simultaneous processes spawned --- Backtrace: ▆ 1. └─miRspongeR::spongeMethod(miRTarget, ExpData, mres, method = "cernia") 2. └─miRspongeR:::cernia(...) 3. └─miRspongeR:::dtHybrid(miRTargetCandidate) 4. └─parallel::makeCluster(detectCores() - 2) 5. └─parallel::makePSOCKcluster(names = spec, ...) 6. └─parallel:::.check_ncores(length(names)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'miRspongeR.Rmd' failed with diagnostics: 70 simultaneous processes spawned --- failed re-building ‘miRspongeR.Rmd’ SUMMARY: processing the following file failed: ‘miRspongeR.Rmd’ Error: Vignette re-building failed. Execution halted